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The map label for this gene is yjdI [H]

Identifier: 18310339

GI number: 18310339

Start: 1600850

End: 1601335

Strand: Reverse

Name: yjdI [H]

Synonym: CPE1357

Alternate gene names: 18310339

Gene position: 1601335-1600850 (Counterclockwise)

Preceding gene: 18310340

Following gene: 18310337

Centisome position: 52.82

GC content: 29.63

Gene sequence:

>486_bases
ATGGCAAAAGATAAGAAGATTAAGACAAATGCTATGAGAATATTAGATTCTAAAAAAGTTTCATATGAAATGTTAAGCTA
TGAAAGTGAAGATGGAAAGATAGATGGAATTTCTGTAGCTCATAAAATAGGCGTAGATGAGAAGAATGTATTTAAAACAC
TAGTGGCTCAAGGAACAAGTAAAGAGTTATATGTTTTTGTTATACCAGTAGCAGAAGAATTAGATTTAAAGAATGCTGCT
AAGATAGCAGGCGAAAAGAAAGTTGAAATGATAGCAGTTAAGGATATAATGAAATATACTGGATATATTCGTGGTGGATG
TTCCCCTATAGGAATGAAAAAGAATTATAAAACCTTTATACATGAGAGTGCAGAAGATTTAGATTTTATAATATTTAGTG
CAGGAAAGATAGGACATCAAATAAAAATGAATCCAAAAGACTTATTAAGTGTTGTAGAAGGGGAATTTGCATTTTTAATA
AAATAG

Upstream 100 bases:

>100_bases
TTGATATTAACTTTATTTGAGATAATATTAAGTTAGGCTTTAGTTTTTAAAGAATTTTATTGTATAATAATAAATAGTTT
AAGTTTAAGAGGTGAAATTT

Downstream 100 bases:

>100_bases
TAAAAACTAATTAGAATATAGTTTAAAAGAACTTTTAAGAAATTAAAAGTTTAGAATTTTAAAATAAATTTTAATTATTA
AATGAAAGAGAAGCCACAAA

Product: ybaK/ebsC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAKDKKIKTNAMRILDSKKVSYEMLSYESEDGKIDGISVAHKIGVDEKNVFKTLVAQGTSKELYVFVIPVAEELDLKNAA
KIAGEKKVEMIAVKDIMKYTGYIRGGCSPIGMKKNYKTFIHESAEDLDFIIFSAGKIGHQIKMNPKDLLSVVEGEFAFLI
K

Sequences:

>Translated_161_residues
MAKDKKIKTNAMRILDSKKVSYEMLSYESEDGKIDGISVAHKIGVDEKNVFKTLVAQGTSKELYVFVIPVAEELDLKNAA
KIAGEKKVEMIAVKDIMKYTGYIRGGCSPIGMKKNYKTFIHESAEDLDFIIFSAGKIGHQIKMNPKDLLSVVEGEFAFLI
K
>Mature_160_residues
AKDKKIKTNAMRILDSKKVSYEMLSYESEDGKIDGISVAHKIGVDEKNVFKTLVAQGTSKELYVFVIPVAEELDLKNAAK
IAGEKKVEMIAVKDIMKYTGYIRGGCSPIGMKKNYKTFIHESAEDLDFIIFSAGKIGHQIKMNPKDLLSVVEGEFAFLIK

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786688, Length=152, Percent_Identity=38.1578947368421, Blast_Score=98, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 17955; Mature: 17824

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDKKIKTNAMRILDSKKVSYEMLSYESEDGKIDGISVAHKIGVDEKNVFKTLVAQGTS
CCCCCCCHHHHHHHHHCCCCHHHHHEECCCCCCCCCEEEHHHCCCCHHHHHHHHHHCCCC
KELYVFVIPVAEELDLKNAAKIAGEKKVEMIAVKDIMKYTGYIRGGCSPIGMKKNYKTFI
CEEEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHH
HESAEDLDFIIFSAGKIGHQIKMNPKDLLSVVEGEFAFLIK
HCCCCCCEEEEEECCCCCCEEECCHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
AKDKKIKTNAMRILDSKKVSYEMLSYESEDGKIDGISVAHKIGVDEKNVFKTLVAQGTS
CCCCCCHHHHHHHHHCCCCHHHHHEECCCCCCCCCEEEHHHCCCCHHHHHHHHHHCCCC
KELYVFVIPVAEELDLKNAAKIAGEKKVEMIAVKDIMKYTGYIRGGCSPIGMKKNYKTFI
CEEEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHH
HESAEDLDFIIFSAGKIGHQIKMNPKDLLSVVEGEFAFLIK
HCCCCCCEEEEEECCCCCCEEECCHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]