Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is entB [H]

Identifier: 18310336

GI number: 18310336

Start: 1597967

End: 1599616

Strand: Reverse

Name: entB [H]

Synonym: CPE1354

Alternate gene names: 18310336

Gene position: 1599616-1597967 (Counterclockwise)

Preceding gene: 18310337

Following gene: 18310335

Centisome position: 52.77

GC content: 32.12

Gene sequence:

>1650_bases
ATGAATAGGAATAAGATAGCAGCTTTGATTTTTGCTGTATCAACAGTATGTGTTGTATCAGCACACAGTGAAAATGCTTA
TGCAACAGAGCATAAAAATTCTAATCAATTAGAAGAAAATAATCAAACAAGATCGGTAAAAAAAGGGCAAGTTATAAATG
TAAGTACGAATTTAAGAATTAGAAAGAGTCCAAATACAAGCAGTGATGTTATTGGATATTTAACTAATGGTGAAATTTTT
AATATAGATGGAAAAGAAGGTTCATGGTATAAAATAAATGCTAATGGTAAAGTTGGCTATATTCATGGAGATTATGTTAA
AGAAGTAACTGGAAATTCTAATAGTAGCAGCAATAATAGTGGAAGTAATTCAAATTTAGATACTTCATTAGCTGGGAAAA
AGGGTACTGTTGTAAACGTAAGTACTTCTTTAAGAGTTAGACAATCACCAAGCACAAGTAGCTCAGTTGTAGGTAGCCTA
AGAGGTGGTCAGACATTTGAGATAAAGGGTAAAAGTGGAAGTTGGTATTATATAAATGCAAATGGACTTACAGGCTATAT
TCATGGAGATTATGTACAAGTAGGTGAAAATAGTTCAAATAATGGTGGGCAATCATCAGGAAATAATGGACAATCATCAG
AAAATAACTCAGGAATGGATACTTCATTAGCAGGAAAAACTGGTAAGGTTGTAAATGTAAGTACTTCTTTAAGAATTAGA
CAATCACCAAGTACAAGTAGCTCAGTTGTTGGATCATTAAGTGCAGGCCAAACTTTTAAGATAAATGGTAAAAATGGAGC
TTGGTATAATATTGATGCACAAGGAACAAAAGGACATGTTCATGGAGATTATGTACAAGTATTAAGTGGAAACGAAAGTT
CTAATAGTGGAAGTAATAATAATCAAAGTGGAAGCCAAAATAACAATTTAGATGAATCTTATAATGGAAAAGCTGGAAAG
GTTGTAAATGTAACAACTAATTTAAGACTTAGAAGTCAACCTAGTACTAGTAGTTCTGTTTTAGCATATTTATTACCTAA
TGAAAGATTTACTTTACAGGGAAAGACTTCTTCAGGATGGTTTAAAGTAAATTATAATGGAAAAATTGGTTATTTACATG
AAGATTATGTTAAAATAGTATCTTCAGATGAAGGAGCAAATGGAAATACAGGTGGAAGCACAGGTGGTGGACAAGTTAAC
CAAAGTAAATATGAACAAGTTTTAAGTATTATGAAGTCTCAAATTGGTTCTCCATATATTTATGGAGGTGCTGGAGAAAC
ACTAACTTCAAGCTTATTAAGTAGCTTAAGAAGAACTTTCCCAGATCATGCTGCAAGAGGATTTTATGATATACCATCAA
ACTATTTAAATGGAAATTACAGAGCTTTTGATTGCTCTGGATTAATGCAATGGAGTTTTAGACAAGCTGGAATTAGTTTA
GGAAGAACAACTTGGGATCAAATAAACAATGGATATGAAGTTTCTCCAAGTAATGCTAAGCCAGGAGACTTATTATTCTT
TAGTAATTTAGGCCATGTAGGTATGTATATAGGAAATGGTCAATGGATAGAGGCTCCTAACAAAGGTAAATTTGTTTCTA
TTACATCTGTTCCATGGAGTAAAATAGGAAGAGCAAGAAGAGTTCTTTAA

Upstream 100 bases:

>100_bases
TTGTAACTGTTTTATTGATAAATTTTACTAAAGAATATATTATAGAATATGAAGGATTATTTTAGGCAGGGCGTAATATG
ACTACTAGGGAGGATTGTGT

Downstream 100 bases:

>100_bases
GATTAACATAATAAATTTATTATAAAGCAAGTTATATTTAGTAATAGCTTACTAAATATGACTTGTTTTTTTTATTTATT
CAATATACATTTTTTGTAAA

Product: enterotoxin

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MNRNKIAALIFAVSTVCVVSAHSENAYATEHKNSNQLEENNQTRSVKKGQVINVSTNLRIRKSPNTSSDVIGYLTNGEIF
NIDGKEGSWYKINANGKVGYIHGDYVKEVTGNSNSSSNNSGSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSL
RGGQTFEIKGKSGSWYYINANGLTGYIHGDYVQVGENSSNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIR
QSPSTSSSVVGSLSAGQTFKINGKNGAWYNIDAQGTKGHVHGDYVQVLSGNESSNSGSNNNQSGSQNNNLDESYNGKAGK
VVNVTTNLRLRSQPSTSSSVLAYLLPNERFTLQGKTSSGWFKVNYNGKIGYLHEDYVKIVSSDEGANGNTGGSTGGGQVN
QSKYEQVLSIMKSQIGSPYIYGGAGETLTSSLLSSLRRTFPDHAARGFYDIPSNYLNGNYRAFDCSGLMQWSFRQAGISL
GRTTWDQINNGYEVSPSNAKPGDLLFFSNLGHVGMYIGNGQWIEAPNKGKFVSITSVPWSKIGRARRVL

Sequences:

>Translated_549_residues
MNRNKIAALIFAVSTVCVVSAHSENAYATEHKNSNQLEENNQTRSVKKGQVINVSTNLRIRKSPNTSSDVIGYLTNGEIF
NIDGKEGSWYKINANGKVGYIHGDYVKEVTGNSNSSSNNSGSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSL
RGGQTFEIKGKSGSWYYINANGLTGYIHGDYVQVGENSSNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIR
QSPSTSSSVVGSLSAGQTFKINGKNGAWYNIDAQGTKGHVHGDYVQVLSGNESSNSGSNNNQSGSQNNNLDESYNGKAGK
VVNVTTNLRLRSQPSTSSSVLAYLLPNERFTLQGKTSSGWFKVNYNGKIGYLHEDYVKIVSSDEGANGNTGGSTGGGQVN
QSKYEQVLSIMKSQIGSPYIYGGAGETLTSSLLSSLRRTFPDHAARGFYDIPSNYLNGNYRAFDCSGLMQWSFRQAGISL
GRTTWDQINNGYEVSPSNAKPGDLLFFSNLGHVGMYIGNGQWIEAPNKGKFVSITSVPWSKIGRARRVL
>Mature_549_residues
MNRNKIAALIFAVSTVCVVSAHSENAYATEHKNSNQLEENNQTRSVKKGQVINVSTNLRIRKSPNTSSDVIGYLTNGEIF
NIDGKEGSWYKINANGKVGYIHGDYVKEVTGNSNSSSNNSGSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSL
RGGQTFEIKGKSGSWYYINANGLTGYIHGDYVQVGENSSNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIR
QSPSTSSSVVGSLSAGQTFKINGKNGAWYNIDAQGTKGHVHGDYVQVLSGNESSNSGSNNNQSGSQNNNLDESYNGKAGK
VVNVTTNLRLRSQPSTSSSVLAYLLPNERFTLQGKTSSGWFKVNYNGKIGYLHEDYVKIVSSDEGANGNTGGSTGGGQVN
QSKYEQVLSIMKSQIGSPYIYGGAGETLTSSLLSSLRRTFPDHAARGFYDIPSNYLNGNYRAFDCSGLMQWSFRQAGISL
GRTTWDQINNGYEVSPSNAKPGDLLFFSNLGHVGMYIGNGQWIEAPNKGKFVSITSVPWSKIGRARRVL

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=96, Percent_Identity=43.75, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 58669; Mature: 58669

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNKIAALIFAVSTVCVVSAHSENAYATEHKNSNQLEENNQTRSVKKGQVINVSTNLRI
CCCHHHHHHHHHHEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEE
RKSPNTSSDVIGYLTNGEIFNIDGKEGSWYKINANGKVGYIHGDYVKEVTGNSNSSSNNS
EECCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCEEEEEECCHHHHHCCCCCCCCCCC
GSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRGGQTFEIKGKSGSWYYINA
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEC
NGLTGYIHGDYVQVGENSSNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIR
CCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
QSPSTSSSVVGSLSAGQTFKINGKNGAWYNIDAQGTKGHVHGDYVQVLSGNESSNSGSNN
CCCCCCHHHEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCC
NQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNERFTLQGKTSSGW
CCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEECCCCCE
FKVNYNGKIGYLHEDYVKIVSSDEGANGNTGGSTGGGQVNQSKYEQVLSIMKSQIGSPYI
EEEEECCEEEEEEHHHEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
YGGAGETLTSSLLSSLRRTFPDHAARGFYDIPSNYLNGNYRAFDCSGLMQWSFRQAGISL
ECCCCHHHHHHHHHHHHHHCCHHHHCCEEECCHHHCCCCEEEEECCCCHHHHHHHHCCCC
GRTTWDQINNGYEVSPSNAKPGDLLFFSNLGHVGMYIGNGQWIEAPNKGKFVSITSVPWS
CCCCHHHCCCCEEECCCCCCCCCEEEEECCCCEEEEECCCEEEECCCCCCEEEEECCCHH
KIGRARRVL
HHHHHHCCC
>Mature Secondary Structure
MNRNKIAALIFAVSTVCVVSAHSENAYATEHKNSNQLEENNQTRSVKKGQVINVSTNLRI
CCCHHHHHHHHHHEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEE
RKSPNTSSDVIGYLTNGEIFNIDGKEGSWYKINANGKVGYIHGDYVKEVTGNSNSSSNNS
EECCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCEEEEEECCHHHHHCCCCCCCCCCC
GSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRGGQTFEIKGKSGSWYYINA
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEC
NGLTGYIHGDYVQVGENSSNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIR
CCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
QSPSTSSSVVGSLSAGQTFKINGKNGAWYNIDAQGTKGHVHGDYVQVLSGNESSNSGSNN
CCCCCCHHHEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCC
NQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNERFTLQGKTSSGW
CCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEECCCCCE
FKVNYNGKIGYLHEDYVKIVSSDEGANGNTGGSTGGGQVNQSKYEQVLSIMKSQIGSPYI
EEEEECCEEEEEEHHHEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
YGGAGETLTSSLLSSLRRTFPDHAARGFYDIPSNYLNGNYRAFDCSGLMQWSFRQAGISL
ECCCCHHHHHHHHHHHHHHCCHHHHCCEEECCHHHCCCCEEEEECCCCHHHHHHHHCCCC
GRTTWDQINNGYEVSPSNAKPGDLLFFSNLGHVGMYIGNGQWIEAPNKGKFVSITSVPWS
CCCCHHHCCCCEEECCCCCCCCCEEEEECCCCEEEEECCCEEEECCCCCCEEEEECCCHH
KIGRARRVL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1514809; 11679669; 1459966 [H]