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The map label for this gene is cggR [H]

Identifier: 18310287

GI number: 18310287

Start: 1544797

End: 1545876

Strand: Reverse

Name: cggR [H]

Synonym: CPE1305

Alternate gene names: 18310287

Gene position: 1545876-1544797 (Counterclockwise)

Preceding gene: 18310288

Following gene: 18310286

Centisome position: 50.99

GC content: 31.85

Gene sequence:

>1080_bases
TTGAGAAGCGAGTGGGACTTAGAGTGTCCAAAGGAGTTGTTAAATTTGCTAGAGATTTTAAAATTGCAAAAGATAATAGT
TCCTGAAATGGTAGAACTATTAGTTAAAAGATACAATATAATCAGAACAATTTATTATAATCAGCCAATAGGTAGAAGAG
CTTTGGCAAACAATTTAAATTTAGGTGAAAGAATTGTAAGAACAGAAATAGGTTTTTTAAAATCTCAAAACCTTATACAA
ATAAACACTCCAGGTATGTCTGTAACCCAAGAAGGAGAGTTCATGTTAGAATCTTTAAAAGGATTTATACATGAAATAAA
AGGGCTATCTAATCTTGAGAAGCAATTATGTGATATGCTTCATGTAAGAAATGTAATTGTTGTTCCAGGAGATTGCAGTG
AGGATGAAAACACTATAAAAGAGCTTGGAAAAGCCGCTGCAAATTATTCTAAGAATATCATTAAAGATGGCTATACTATT
GCTGTTACTGGTGGAAGTACTGTAAAAGAAGTTATAGACGAATTACCAGAAATGGCAAACCTAAAAAATGTGTTAGTGGT
GCCTGCAAGAGGTGGTATGGGTAAGAAGGTTGAGACGCAGTCAAATACATTAGCTGCAAATTTAGCTAAAAAGTTAAATG
GAACCTATAAAATGCTTCATGTTCCTGATAATATAAGCAAAGAAGTAATGGATGCTTTAATGAAGCAGGAAGATATGAAG
GAACTTATACAAAATATTAAAAATGCAGATATGCTAATATATGGTATAGGTCAGGCTAAAAAGATGGCTAACAAAAGAGG
AGTGCCTAAGGATCAAATAATAAAGTTATTAGATTTAGGTGCTATAGGAGAAGCTTTTGGATGCTACTTTAATGATAAGT
CAGAAGTTGTTTATGTAATGCCAACTTTAGGGGTTACAATAAATGATCTTAGAAAAATAAAAAATCACATAGCTGTAGCT
GGTGGTAAGAATAAAGCAGAAGCTATATTAACTACTGTTTATGGCAATGAAAATGCCGTGCTTATTACTGATGAAGGAGC
AGCTAATGAAATTTTAAATTTTTTAAATAGAGATGAATAA

Upstream 100 bases:

>100_bases
CTCTCTATATTTTTTTATATTTTTTAAAAAAATAAGAAAAAATTTTCTAAAAACCCTTTAATTTTTTCTTAATATGTTTT
ATAATAAACGTGCGGGACAT

Downstream 100 bases:

>100_bases
AAAAATATGAAATCTCTAAAAATAACTTTGTTTAAAATATTTTTAAATATTTTATATATAAAAAACAACATCTTTTAGGA
GGTATTTATAATGGTAAAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MRSEWDLECPKELLNLLEILKLQKIIVPEMVELLVKRYNIIRTIYYNQPIGRRALANNLNLGERIVRTEIGFLKSQNLIQ
INTPGMSVTQEGEFMLESLKGFIHEIKGLSNLEKQLCDMLHVRNVIVVPGDCSEDENTIKELGKAAANYSKNIIKDGYTI
AVTGGSTVKEVIDELPEMANLKNVLVVPARGGMGKKVETQSNTLAANLAKKLNGTYKMLHVPDNISKEVMDALMKQEDMK
ELIQNIKNADMLIYGIGQAKKMANKRGVPKDQIIKLLDLGAIGEAFGCYFNDKSEVVYVMPTLGVTINDLRKIKNHIAVA
GGKNKAEAILTTVYGNENAVLITDEGAANEILNFLNRDE

Sequences:

>Translated_359_residues
MRSEWDLECPKELLNLLEILKLQKIIVPEMVELLVKRYNIIRTIYYNQPIGRRALANNLNLGERIVRTEIGFLKSQNLIQ
INTPGMSVTQEGEFMLESLKGFIHEIKGLSNLEKQLCDMLHVRNVIVVPGDCSEDENTIKELGKAAANYSKNIIKDGYTI
AVTGGSTVKEVIDELPEMANLKNVLVVPARGGMGKKVETQSNTLAANLAKKLNGTYKMLHVPDNISKEVMDALMKQEDMK
ELIQNIKNADMLIYGIGQAKKMANKRGVPKDQIIKLLDLGAIGEAFGCYFNDKSEVVYVMPTLGVTINDLRKIKNHIAVA
GGKNKAEAILTTVYGNENAVLITDEGAANEILNFLNRDE
>Mature_359_residues
MRSEWDLECPKELLNLLEILKLQKIIVPEMVELLVKRYNIIRTIYYNQPIGRRALANNLNLGERIVRTEIGFLKSQNLIQ
INTPGMSVTQEGEFMLESLKGFIHEIKGLSNLEKQLCDMLHVRNVIVVPGDCSEDENTIKELGKAAANYSKNIIKDGYTI
AVTGGSTVKEVIDELPEMANLKNVLVVPARGGMGKKVETQSNTLAANLAKKLNGTYKMLHVPDNISKEVMDALMKQEDMK
ELIQNIKNADMLIYGIGQAKKMANKRGVPKDQIIKLLDLGAIGEAFGCYFNDKSEVVYVMPTLGVTINDLRKIKNHIAVA
GGKNKAEAILTTVYGNENAVLITDEGAANEILNFLNRDE

Specific function: Represses the transcription of the gapA gene [H]

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI87082414, Length=261, Percent_Identity=25.2873563218391, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787791, Length=258, Percent_Identity=24.8062015503876, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 39914; Mature: 39914

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSEWDLECPKELLNLLEILKLQKIIVPEMVELLVKRYNIIRTIYYNQPIGRRALANNLN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCC
LGERIVRTEIGFLKSQNLIQINTPGMSVTQEGEFMLESLKGFIHEIKGLSNLEKQLCDML
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
HVRNVIVVPGDCSEDENTIKELGKAAANYSKNIIKDGYTIAVTGGSTVKEVIDELPEMAN
HHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC
LKNVLVVPARGGMGKKVETQSNTLAANLAKKLNGTYKMLHVPDNISKEVMDALMKQEDMK
CCCEEEEECCCCCCCEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
ELIQNIKNADMLIYGIGQAKKMANKRGVPKDQIIKLLDLGAIGEAFGCYFNDKSEVVYVM
HHHHHCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCEECCCCCEEEEE
PTLGVTINDLRKIKNHIAVAGGKNKAEAILTTVYGNENAVLITDEGAANEILNFLNRDE
CCCCCCHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRSEWDLECPKELLNLLEILKLQKIIVPEMVELLVKRYNIIRTIYYNQPIGRRALANNLN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCC
LGERIVRTEIGFLKSQNLIQINTPGMSVTQEGEFMLESLKGFIHEIKGLSNLEKQLCDML
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
HVRNVIVVPGDCSEDENTIKELGKAAANYSKNIIKDGYTIAVTGGSTVKEVIDELPEMAN
HHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC
LKNVLVVPARGGMGKKVETQSNTLAANLAKKLNGTYKMLHVPDNISKEVMDALMKQEDMK
CCCEEEEECCCCCCCEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
ELIQNIKNADMLIYGIGQAKKMANKRGVPKDQIIKLLDLGAIGEAFGCYFNDKSEVVYVM
HHHHHCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCEECCCCCEEEEE
PTLGVTINDLRKIKNHIAVAGGKNKAEAILTTVYGNENAVLITDEGAANEILNFLNRDE
CCCCCCHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]