Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310231

Identifier: 18310231

GI number: 18310231

Start: 1456945

End: 1457436

Strand: Reverse

Name: 18310231

Synonym: CPE1249

Alternate gene names: NA

Gene position: 1457436-1456945 (Counterclockwise)

Preceding gene: 18310232

Following gene: 18310230

Centisome position: 48.08

GC content: 26.02

Gene sequence:

>492_bases
GTGGGGAAAAAGGTAATATTCCCTATAGTGATTATAATGCTTATTCTTGGAGTTCTTGTTTCTATTTTTATTAAAGAAGA
TAATTCCTTTAAGGTGAAGGAAAGTGAAGTAGTGGCAATGAAATACTATATGAATAAAGAAAGAAATGAAAATTACCATA
ATGTACCTAAGGATTTAGAGAAGAAGAGTATTGAAGAGGTAGTAAGTGTTTTAAATGAAAGTGATGTTACGGAAAAAAAG
AACTTTGCACCAATAACTGATAGTGATAGGAAATTATATATATTTTTAAAAAACAATGATGTAATTGTTATAAATAATAA
TAGTATAGATGAGGAAAAATACATAGTTGAATATCCTAATGACTCAATTTTAGGTAGCAGTAATAAATCAAAATATATGG
TAATAAACTCAGAAAGGTTAAAAAATGTCTTTTTAAATATAGAAAATTCTTTTAATGATGTAAACGATTATAGGCAGAGA
ATGAGAGTATAG

Upstream 100 bases:

>100_bases
AAAAGAAAATACACCCATTTATGCATGTTAACTTTAAAATTGTAAAAAAATGTTGTATTATATAAGTAGATGTGAACATA
AATAGATAGGGGGTAATTTT

Downstream 100 bases:

>100_bases
AGAGTTTTCATATTACAATCTTATATTAATAAAAGCGATTTAAAAATTTTTTTAAATCGCTTTTAATTTTGAATTTTATT
TAAATTAATGTAAAATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MGKKVIFPIVIIMLILGVLVSIFIKEDNSFKVKESEVVAMKYYMNKERNENYHNVPKDLEKKSIEEVVSVLNESDVTEKK
NFAPITDSDRKLYIFLKNNDVIVINNNSIDEEKYIVEYPNDSILGSSNKSKYMVINSERLKNVFLNIENSFNDVNDYRQR
MRV

Sequences:

>Translated_163_residues
MGKKVIFPIVIIMLILGVLVSIFIKEDNSFKVKESEVVAMKYYMNKERNENYHNVPKDLEKKSIEEVVSVLNESDVTEKK
NFAPITDSDRKLYIFLKNNDVIVINNNSIDEEKYIVEYPNDSILGSSNKSKYMVINSERLKNVFLNIENSFNDVNDYRQR
MRV
>Mature_162_residues
GKKVIFPIVIIMLILGVLVSIFIKEDNSFKVKESEVVAMKYYMNKERNENYHNVPKDLEKKSIEEVVSVLNESDVTEKKN
FAPITDSDRKLYIFLKNNDVIVINNNSIDEEKYIVEYPNDSILGSSNKSKYMVINSERLKNVFLNIENSFNDVNDYRQRM
RV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19082; Mature: 18951

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKVIFPIVIIMLILGVLVSIFIKEDNSFKVKESEVVAMKYYMNKERNENYHNVPKDLE
CCCCHHHHHHHHHHHHHHHHHEECCCCCCEEEECHHEEEHHHHHCCCCCCCCCCCCHHHH
KKSIEEVVSVLNESDVTEKKNFAPITDSDRKLYIFLKNNDVIVINNNSIDEEKYIVEYPN
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCEEEEECCC
DSILGSSNKSKYMVINSERLKNVFLNIENSFNDVNDYRQRMRV
CCEECCCCCCEEEEEEHHHHHEEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure 
GKKVIFPIVIIMLILGVLVSIFIKEDNSFKVKESEVVAMKYYMNKERNENYHNVPKDLE
CCCHHHHHHHHHHHHHHHHHEECCCCCCEEEECHHEEEHHHHHCCCCCCCCCCCCHHHH
KKSIEEVVSVLNESDVTEKKNFAPITDSDRKLYIFLKNNDVIVINNNSIDEEKYIVEYPN
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCEEEEECCC
DSILGSSNKSKYMVINSERLKNVFLNIENSFNDVNDYRQRMRV
CCEECCCCCCEEEEEEHHHHHEEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA