Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310232

Identifier: 18310232

GI number: 18310232

Start: 1457655

End: 1458872

Strand: Reverse

Name: 18310232

Synonym: CPE1250

Alternate gene names: NA

Gene position: 1458872-1457655 (Counterclockwise)

Preceding gene: 18310233

Following gene: 18310231

Centisome position: 48.12

GC content: 20.85

Gene sequence:

>1218_bases
ATGTTAGTTAAAGAATATGAAGTAAAAGTTTCTAAAGATAAAGAGAAAAATAAGGTTTTTTATAATTCACAGAGTTTAAA
TGAGAAGTTTTTAAAGCTATATATGCATATAAAAGAATATGAAAAGGAAAATAAACTATTAATAATGATTTTAAAGTTAA
GAGAATATATAAAGGATTTAAAAATAGAATTAGAATCCTTAGAAAAATGTGCAAGTAGCAATGGGGAGGATAATAAAATA
AACTATTTTTTAAAGAAAGCAAAAAGAGAATTTAAGGAGATAGATATAAAACTTAACTCTATAAATAAAGATAATTTTAA
ATCTTTAGAAGAGGAATTAATAGATGAAGTTCTATTAAATTTAAAGTATAAATTATTAGAATCTATTAAAGAGTATAATG
AAGAGTTAAACAGGGATTATTTATATCACAATGAGTTAAGAGTTGATTTTGGAATTCAATGTAAGGATTTAAAAGAAAAG
TTCTTAGAAGAATTAAAAACTTATCTAGAAAGTTCTTCTAAAAGAATTAAAGAAAATATTAATTTAAAAAGCAAAGTAGT
ATTAAAGGAAATAAAATTATCTTCAAAGGAAGATATTAATTTAGACCTAGTAGATATAATAAAAAATGATATTTTAGAAT
TAAATTCTGTAAATGAGGAAATATTTAATATTTATAAAAAATATGAGAAAGCAATCCATGAGAGTTTTTTTGAAAGTTTA
AATAAATTAGGAATAAAGAAATCAGATAACCTTGTTTCATATAAATGTGAAAAGGTTGATTATACTTCCTTAAATAAGAG
ATTTTTTAAGCTTATAGAATCTTTCAACAAGGGATTTTTAAAAAATAAAATTTTAATTGATATAGAGAATTTCATAGGAC
ATGAAAATATAGAAAATAAAATGGAAATAGAACTTTTATACGCCTTAGATTTATTTAAGGAAGAGTATATTAAAAGCATA
GAGGAGTTAATTTTAAACTTGAAAGAAAGATTAGAGGAAAATATATATTCTAATTTTGAAGGTGATTATGGAAAGTTATT
TTCAGTAGAAGGTCAAAGTGAAATCTTAAATAATATGTATTTAAATTTAAAAAATGTAGAATCAAATAATTTTAATAAAA
TAACCTTAGTTGATTATTTAAACAATAGCAAAAGAGAGATATCAAAATATAGCAATAAAACTCACAACCATATTTCTAGA
ATTAATAGAATTCCCTAA

Upstream 100 bases:

>100_bases
CCATGAAGAGTTAAAAAGTGAATTAGATAAAAAATATTACTTTTTAGTAATTAGCATAGTAATTGTAGGCATTTTAGCAG
TTTTATTTTAGGAGAAAACA

Downstream 100 bases:

>100_bases
GAATTTATAATAATTGCTTAAGATATTACTAAAGCTTCAAAAGTTAAGTTAAAGTCAAAAGTTTTAATTTTGATTTTTAA
ATTTATACAATGGAGCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MLVKEYEVKVSKDKEKNKVFYNSQSLNEKFLKLYMHIKEYEKENKLLIMILKLREYIKDLKIELESLEKCASSNGEDNKI
NYFLKKAKREFKEIDIKLNSINKDNFKSLEEELIDEVLLNLKYKLLESIKEYNEELNRDYLYHNELRVDFGIQCKDLKEK
FLEELKTYLESSSKRIKENINLKSKVVLKEIKLSSKEDINLDLVDIIKNDILELNSVNEEIFNIYKKYEKAIHESFFESL
NKLGIKKSDNLVSYKCEKVDYTSLNKRFFKLIESFNKGFLKNKILIDIENFIGHENIENKMEIELLYALDLFKEEYIKSI
EELILNLKERLEENIYSNFEGDYGKLFSVEGQSEILNNMYLNLKNVESNNFNKITLVDYLNNSKREISKYSNKTHNHISR
INRIP

Sequences:

>Translated_405_residues
MLVKEYEVKVSKDKEKNKVFYNSQSLNEKFLKLYMHIKEYEKENKLLIMILKLREYIKDLKIELESLEKCASSNGEDNKI
NYFLKKAKREFKEIDIKLNSINKDNFKSLEEELIDEVLLNLKYKLLESIKEYNEELNRDYLYHNELRVDFGIQCKDLKEK
FLEELKTYLESSSKRIKENINLKSKVVLKEIKLSSKEDINLDLVDIIKNDILELNSVNEEIFNIYKKYEKAIHESFFESL
NKLGIKKSDNLVSYKCEKVDYTSLNKRFFKLIESFNKGFLKNKILIDIENFIGHENIENKMEIELLYALDLFKEEYIKSI
EELILNLKERLEENIYSNFEGDYGKLFSVEGQSEILNNMYLNLKNVESNNFNKITLVDYLNNSKREISKYSNKTHNHISR
INRIP
>Mature_405_residues
MLVKEYEVKVSKDKEKNKVFYNSQSLNEKFLKLYMHIKEYEKENKLLIMILKLREYIKDLKIELESLEKCASSNGEDNKI
NYFLKKAKREFKEIDIKLNSINKDNFKSLEEELIDEVLLNLKYKLLESIKEYNEELNRDYLYHNELRVDFGIQCKDLKEK
FLEELKTYLESSSKRIKENINLKSKVVLKEIKLSSKEDINLDLVDIIKNDILELNSVNEEIFNIYKKYEKAIHESFFESL
NKLGIKKSDNLVSYKCEKVDYTSLNKRFFKLIESFNKGFLKNKILIDIENFIGHENIENKMEIELLYALDLFKEEYIKSI
EELILNLKERLEENIYSNFEGDYGKLFSVEGQSEILNNMYLNLKNVESNNFNKITLVDYLNNSKREISKYSNKTHNHISR
INRIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48445; Mature: 48445

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVKEYEVKVSKDKEKNKVFYNSQSLNEKFLKLYMHIKEYEKENKLLIMILKLREYIKDL
CCCCHHEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
KIELESLEKCASSNGEDNKINYFLKKAKREFKEIDIKLNSINKDNFKSLEEELIDEVLLN
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHH
LKYKLLESIKEYNEELNRDYLYHNELRVDFGIQCKDLKEKFLEELKTYLESSSKRIKENI
HHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NLKSKVVLKEIKLSSKEDINLDLVDIIKNDILELNSVNEEIFNIYKKYEKAIHESFFESL
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKLGIKKSDNLVSYKCEKVDYTSLNKRFFKLIESFNKGFLKNKILIDIENFIGHENIENK
HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHCCCEEEEEHHHCCCCCCCCH
MEIELLYALDLFKEEYIKSIEELILNLKERLEENIYSNFEGDYGKLFSVEGQSEILNNMY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHH
LNLKNVESNNFNKITLVDYLNNSKREISKYSNKTHNHISRINRIP
HEEEECCCCCCCEEEEEEHHCCCHHHHHHHHCHHHHHHHHHCCCC
>Mature Secondary Structure
MLVKEYEVKVSKDKEKNKVFYNSQSLNEKFLKLYMHIKEYEKENKLLIMILKLREYIKDL
CCCCHHEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
KIELESLEKCASSNGEDNKINYFLKKAKREFKEIDIKLNSINKDNFKSLEEELIDEVLLN
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHH
LKYKLLESIKEYNEELNRDYLYHNELRVDFGIQCKDLKEKFLEELKTYLESSSKRIKENI
HHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NLKSKVVLKEIKLSSKEDINLDLVDIIKNDILELNSVNEEIFNIYKKYEKAIHESFFESL
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKLGIKKSDNLVSYKCEKVDYTSLNKRFFKLIESFNKGFLKNKILIDIENFIGHENIENK
HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHCCCEEEEEHHHCCCCCCCCH
MEIELLYALDLFKEEYIKSIEELILNLKERLEENIYSNFEGDYGKLFSVEGQSEILNNMY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHH
LNLKNVESNNFNKITLVDYLNNSKREISKYSNKTHNHISRINRIP
HEEEECCCCCCCEEEEEEHHCCCHHHHHHHHCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA