| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310183
Identifier: 18310183
GI number: 18310183
Start: 1403122
End: 1404039
Strand: Reverse
Name: 18310183
Synonym: CPE1201
Alternate gene names: NA
Gene position: 1404039-1403122 (Counterclockwise)
Preceding gene: 18310185
Following gene: 18310182
Centisome position: 46.32
GC content: 26.91
Gene sequence:
>918_bases ATGAAATTGGACAAGATTACTTTAGTAATAATGGCAGCAGGAATGGGAAGTAGATATGGAGGGTTAAAGCAAATTGATAA AATAGGGCCAAAGGGAGAGACCATAATAGAATATTCCATTTATGATGCTATTAAAGCTGGTGTTACAAAGGTTGTATTTA TAATAAAAAAAGATATTTTTAAGAAATTTAGAGAAACTATAGGGATTAAAATAGAAAATATAATAGAGACTGAATATGTT TTTCAAGAAGTTGATAATTTAGAAAAAGAATTTAAAGGGAAATTTAAAAGAGTTAAACCTTGGGGAACTGGACATGCAAT TTTATGTTGCAAAGGTTTTATAGAGGAACCTTTCATAGTTATAAATGCTGATGATTTTTATGGAAGAGAAACTTATAAAG TACTTTGTGAAGAAATTAAAAAAAGTAAGTGTGATTCTGAATACTTTATGGTGGGGTTTAGGGTAGGAAAAACATTAACT GATTTTGGAAGTGTATCTAGAGGAATATGTGATTTGAATTCTAAGGGAGAATTAATTTCTATTAAAGAAAAAACAAAAAT TATGAAAAAAGGAAATAGTATATGCTATGAAGAGAATGGAAATTATTATAATATTCCTAAAAACACCTTAGTTTCTATGA ATATTTGGGGATTAAAACCTAGCATATTTACAGAACTAGAATATAGATTTTTAAATTTTTTAAAAGATAAAAGTATAGAT AAATGTAAAGAGGAGTTTTATTTGCCTACAGCAATAGATGAGCTTATAAAAGAAGATAGGGTTAATGTTAAGGTTTTAAA AACAAATGAACAATGGTATGGAGTTACTTATAAAGAGGATAAAGAAAGCGTTAGGGATTCTTTAAAAAATTTATCTAAAA AAATTTATCCAGATGATTTGTGGGAGGAGTTTAAATAA
Upstream 100 bases:
>100_bases AAAAATAACAGAAAATTTAGTAAAATAAATTTAACTATATTAAATAACTTATAAAATTTATTTATGGTTTAAGGGGAGAA AAGTATTAAAAAGTGAGGGG
Downstream 100 bases:
>100_bases AATGAACAAGACTTATGATTTTAAAAGCATAACAGAAAATTTTAATTTAGAGGGAGAGCTAAAAACATCAGATAGCCATG TTTGTGGTCATATAAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKLDKITLVIMAAGMGSRYGGLKQIDKIGPKGETIIEYSIYDAIKAGVTKVVFIIKKDIFKKFRETIGIKIENIIETEYV FQEVDNLEKEFKGKFKRVKPWGTGHAILCCKGFIEEPFIVINADDFYGRETYKVLCEEIKKSKCDSEYFMVGFRVGKTLT DFGSVSRGICDLNSKGELISIKEKTKIMKKGNSICYEENGNYYNIPKNTLVSMNIWGLKPSIFTELEYRFLNFLKDKSID KCKEEFYLPTAIDELIKEDRVNVKVLKTNEQWYGVTYKEDKESVRDSLKNLSKKIYPDDLWEEFK
Sequences:
>Translated_305_residues MKLDKITLVIMAAGMGSRYGGLKQIDKIGPKGETIIEYSIYDAIKAGVTKVVFIIKKDIFKKFRETIGIKIENIIETEYV FQEVDNLEKEFKGKFKRVKPWGTGHAILCCKGFIEEPFIVINADDFYGRETYKVLCEEIKKSKCDSEYFMVGFRVGKTLT DFGSVSRGICDLNSKGELISIKEKTKIMKKGNSICYEENGNYYNIPKNTLVSMNIWGLKPSIFTELEYRFLNFLKDKSID KCKEEFYLPTAIDELIKEDRVNVKVLKTNEQWYGVTYKEDKESVRDSLKNLSKKIYPDDLWEEFK >Mature_305_residues MKLDKITLVIMAAGMGSRYGGLKQIDKIGPKGETIIEYSIYDAIKAGVTKVVFIIKKDIFKKFRETIGIKIENIIETEYV FQEVDNLEKEFKGKFKRVKPWGTGHAILCCKGFIEEPFIVINADDFYGRETYKVLCEEIKKSKCDSEYFMVGFRVGKTLT DFGSVSRGICDLNSKGELISIKEKTKIMKKGNSICYEENGNYYNIPKNTLVSMNIWGLKPSIFTELEYRFLNFLKDKSID KCKEEFYLPTAIDELIKEDRVNVKVLKTNEQWYGVTYKEDKESVRDSLKNLSKKIYPDDLWEEFK
Specific function: Unknown
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35368; Mature: 35368
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDKITLVIMAAGMGSRYGGLKQIDKIGPKGETIIEYSIYDAIKAGVTKVVFIIKKDIF CCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH KKFRETIGIKIENIIETEYVFQEVDNLEKEFKGKFKRVKPWGTGHAILCCKGFIEEPFIV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEECCCCCCEEE INADDFYGRETYKVLCEEIKKSKCDSEYFMVGFRVGKTLTDFGSVSRGICDLNSKGELIS EECCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCEECCCCCCCEEE IKEKTKIMKKGNSICYEENGNYYNIPKNTLVSMNIWGLKPSIFTELEYRFLNFLKDKSID EHHHHHHHHCCCCEEEECCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHH KCKEEFYLPTAIDELIKEDRVNVKVLKTNEQWYGVTYKEDKESVRDSLKNLSKKIYPDDL HHHHHCCCCHHHHHHHHHCCCEEEEEEECCCEECCEEHHHHHHHHHHHHHHHHHCCCHHH WEEFK HHHCC >Mature Secondary Structure MKLDKITLVIMAAGMGSRYGGLKQIDKIGPKGETIIEYSIYDAIKAGVTKVVFIIKKDIF CCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH KKFRETIGIKIENIIETEYVFQEVDNLEKEFKGKFKRVKPWGTGHAILCCKGFIEEPFIV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEECCCCCCEEE INADDFYGRETYKVLCEEIKKSKCDSEYFMVGFRVGKTLTDFGSVSRGICDLNSKGELIS EECCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCEECCCCCCCEEE IKEKTKIMKKGNSICYEENGNYYNIPKNTLVSMNIWGLKPSIFTELEYRFLNFLKDKSID EHHHHHHHHCCCCEEEECCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHH KCKEEFYLPTAIDELIKEDRVNVKVLKTNEQWYGVTYKEDKESVRDSLKNLSKKIYPDDL HHHHHCCCCHHHHHHHHHCCCEEEEEEECCCEECCEEHHHHHHHHHHHHHHHHHCCCHHH WEEFK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA