Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310182

Identifier: 18310182

GI number: 18310182

Start: 1402014

End: 1403120

Strand: Reverse

Name: 18310182

Synonym: CPE1200

Alternate gene names: NA

Gene position: 1403120-1402014 (Counterclockwise)

Preceding gene: 18310183

Following gene: 18310181

Centisome position: 46.29

GC content: 28.73

Gene sequence:

>1107_bases
ATGAACAAGACTTATGATTTTAAAAGCATAACAGAAAATTTTAATTTAGAGGGAGAGCTAAAAACATCAGATAGCCATGT
TTGTGGTCATATAAATGATACATTTATAATAAATTGTGAAGGGGAAAATGGAGAAGAAATAAAATATGTTCTTCAAAGAG
TAAACTCTGACATATTCAAAAATCCAGAGCAACTAATGGAGAATATTGAAAATGTTACTTCACATATAAAAAATAAAATT
ATAGAAGAAAATGGAGACCCTTTAAGGGAAACTTTAAATATAGTGAAGACAAAAGAAGGTAAAAATTTTTATAAATGCAA
AGAGGGAAATTATTGGAGAATTTTTAATTTCATACATGACGCTAGTACCTATCAAATAGTTGAAAAACCTGAGCATTTAT
ATACAGCTGGTAAGGCTTTAGGAAAATTCCAAAAGCAATTATCAGATTTTAATGTTGATATGCTTTATGATACAATCCCT
GATTTTCATAATACAGAAAAGAGATTTGAGGCATTTATGGAAGCTGTAAGGGAAGATAAAAAAGGAAGAGCAAAGGATGT
AAAAGAAGAAATAGATTTTGTAATTAACCGTGCTGAAGATACAAAAGTTTTAGTAAATATGATAAAAGAAAATAAACTTC
CTTTAAGAGTTACTCATAATGATACAAAGTTTAATAATATAATGATAGATGATGAAACAGGAGAAGGAATTGCAGTTATT
GATTTAGATACTGTTATGCCAGGACTATCACTATATGACTTTGGAGATTCTATTCGTTCTGGAGCTACAACTGCTTTAGA
AGATGAAGTGGATTTATCTAAGGTAAACTTTGATTTAAATCTTTATGAGCATTTTACAAAAGGGTTTTTAGAGTCAGCAG
GGGATGCCTTTACAAAAGAGGAAATTGAATATTTACCTTTTGCAGCTAAACTTATGACCTTTGAATGTGGAATGAGATTT
CTTATGGATTATTTAAATGGAGATGTTTACTTTAAAATACATAGGGAAAATCACAACTTAGATAGAGCTAGAAATCAATT
TAAGCTTGTTTCTGATATGGAAAAAGAAATGGACAATATGAAGAAGATAGTATATTCATACATTTAA

Upstream 100 bases:

>100_bases
GGAGTTACTTATAAAGAGGATAAAGAAAGCGTTAGGGATTCTTTAAAAAATTTATCTAAAAAAATTTATCCAGATGATTT
GTGGGAGGAGTTTAAATAAA

Downstream 100 bases:

>100_bases
AAACTCTATTTTTATGAAAATATATTTGTCATTCTTTAAAACATTATAAATTTAGATAATCCTAATATGGAATTTAGACA
CTGTTTAAAATGTACAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Mucin-Desulfating Sulfatase; Desulfatase Possibly For Mucin; N-Acetylhexosamine-1-Kinase NahK; Phosphotransferase Family Protein; Phosphotransferase Family; Homoserine/Choline Kinase Family Protein; Desulfatase; Phosphotransferase

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MNKTYDFKSITENFNLEGELKTSDSHVCGHINDTFIINCEGENGEEIKYVLQRVNSDIFKNPEQLMENIENVTSHIKNKI
IEENGDPLRETLNIVKTKEGKNFYKCKEGNYWRIFNFIHDASTYQIVEKPEHLYTAGKALGKFQKQLSDFNVDMLYDTIP
DFHNTEKRFEAFMEAVREDKKGRAKDVKEEIDFVINRAEDTKVLVNMIKENKLPLRVTHNDTKFNNIMIDDETGEGIAVI
DLDTVMPGLSLYDFGDSIRSGATTALEDEVDLSKVNFDLNLYEHFTKGFLESAGDAFTKEEIEYLPFAAKLMTFECGMRF
LMDYLNGDVYFKIHRENHNLDRARNQFKLVSDMEKEMDNMKKIVYSYI

Sequences:

>Translated_368_residues
MNKTYDFKSITENFNLEGELKTSDSHVCGHINDTFIINCEGENGEEIKYVLQRVNSDIFKNPEQLMENIENVTSHIKNKI
IEENGDPLRETLNIVKTKEGKNFYKCKEGNYWRIFNFIHDASTYQIVEKPEHLYTAGKALGKFQKQLSDFNVDMLYDTIP
DFHNTEKRFEAFMEAVREDKKGRAKDVKEEIDFVINRAEDTKVLVNMIKENKLPLRVTHNDTKFNNIMIDDETGEGIAVI
DLDTVMPGLSLYDFGDSIRSGATTALEDEVDLSKVNFDLNLYEHFTKGFLESAGDAFTKEEIEYLPFAAKLMTFECGMRF
LMDYLNGDVYFKIHRENHNLDRARNQFKLVSDMEKEMDNMKKIVYSYI
>Mature_368_residues
MNKTYDFKSITENFNLEGELKTSDSHVCGHINDTFIINCEGENGEEIKYVLQRVNSDIFKNPEQLMENIENVTSHIKNKI
IEENGDPLRETLNIVKTKEGKNFYKCKEGNYWRIFNFIHDASTYQIVEKPEHLYTAGKALGKFQKQLSDFNVDMLYDTIP
DFHNTEKRFEAFMEAVREDKKGRAKDVKEEIDFVINRAEDTKVLVNMIKENKLPLRVTHNDTKFNNIMIDDETGEGIAVI
DLDTVMPGLSLYDFGDSIRSGATTALEDEVDLSKVNFDLNLYEHFTKGFLESAGDAFTKEEIEYLPFAAKLMTFECGMRF
LMDYLNGDVYFKIHRENHNLDRARNQFKLVSDMEKEMDNMKKIVYSYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42830; Mature: 42830

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTYDFKSITENFNLEGELKTSDSHVCGHINDTFIINCEGENGEEIKYVLQRVNSDIFK
CCCCCCHHHHHHCCCCCEEEECCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHCCHHHC
NPEQLMENIENVTSHIKNKIIEENGDPLRETLNIVKTKEGKNFYKCKEGNYWRIFNFIHD
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHHHC
ASTYQIVEKPEHLYTAGKALGKFQKQLSDFNVDMLYDTIPDFHNTEKRFEAFMEAVREDK
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
KGRAKDVKEEIDFVINRAEDTKVLVNMIKENKLPLRVTHNDTKFNNIMIDDETGEGIAVI
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCEEEEE
DLDTVMPGLSLYDFGDSIRSGATTALEDEVDLSKVNFDLNLYEHFTKGFLESAGDAFTKE
EHHHHCCCCEEECCCHHHHCCCCCHHCCCCCHHHEEECHHHHHHHHHHHHHHCCCHHHHH
EIEYLPFAAKLMTFECGMRFLMDYLNGDVYFKIHRENHNLDRARNQFKLVSDMEKEMDNM
HHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KKIVYSYI
HHHHHHCC
>Mature Secondary Structure
MNKTYDFKSITENFNLEGELKTSDSHVCGHINDTFIINCEGENGEEIKYVLQRVNSDIFK
CCCCCCHHHHHHCCCCCEEEECCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHCCHHHC
NPEQLMENIENVTSHIKNKIIEENGDPLRETLNIVKTKEGKNFYKCKEGNYWRIFNFIHD
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHHHC
ASTYQIVEKPEHLYTAGKALGKFQKQLSDFNVDMLYDTIPDFHNTEKRFEAFMEAVREDK
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
KGRAKDVKEEIDFVINRAEDTKVLVNMIKENKLPLRVTHNDTKFNNIMIDDETGEGIAVI
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCEEEEE
DLDTVMPGLSLYDFGDSIRSGATTALEDEVDLSKVNFDLNLYEHFTKGFLESAGDAFTKE
EHHHHCCCCEEECCCHHHHCCCCCHHCCCCCHHHEEECHHHHHHHHHHHHHHCCCHHHHH
EIEYLPFAAKLMTFECGMRFLMDYLNGDVYFKIHRENHNLDRARNQFKLVSDMEKEMDNM
HHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KKIVYSYI
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA