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The map label for this gene is spoVB [H]

Identifier: 18310185

GI number: 18310185

Start: 1406947

End: 1408563

Strand: Reverse

Name: spoVB [H]

Synonym: CPE1203

Alternate gene names: 18310185

Gene position: 1408563-1406947 (Counterclockwise)

Preceding gene: 18310186

Following gene: 18310183

Centisome position: 46.47

GC content: 28.39

Gene sequence:

>1617_bases
ATGAAAGAGCAGTCTATAACTAAAGGCTTTGCAATACTTTCTATTGCAAGCATAGTTGCTAAATTATTATCTTTAATTTA
TGTACCTTTTCTTACTAGAATTGTAGGAAGTGTTGGTATGGGTATATATGGCAAAACCTATGACATATTTGTTTTTGTGT
ATGCTTTAACAAATGTAGGTTTACAAACGGCCATATCAAAATATGTTTCAGAGTTAGATGCAGTTGGCAATTACAAAGAT
GCCTTAAGAGCATTTAAGATTTCAAGAGCATTTTTACTTGTAGTTGGTACAATATTTACTATAGTTTTAATGTTAAGTGC
TAATTTTATAGCAAGTATGAGTCAGACTCCACAAATGGTTTATCCAATAATTTTCTTAGCACCAACAATTATGATAACAA
CAGTCTTAGTTACTTATAAAGGATATTTCCAAGGAAGATCTCAAGCTACACCAATAGCTATAGCAACGGTTATTGAACAG
GTTGCAAATGTATTTTTAAGTTTATTATGTGCATATTTCCTTATAAAGAAAAGTGTATCTTTAGGGGTTGCAGGAGGAAC
TGTAGGATCTTCTGCTGGAGCCTTAATGGCGGTATTATATTTAATATACATATATAATATATATGGAGTTGAAAAAGAGG
CTAAGAGAAAACAAGAGCCTGGAGTTAGAAGAATTACAGGTAAAAAAATAGCAAGAACCTTATTTAAATATGGATTGCCA
ATAACTCTTAGTACTGGACTTCAAAACTTAGGAAATATAATAGATATGTTAACTGTAAGTAATAGACTTGTTGATGCAGC
TAACTTTTCTCAAAGTGATGCTAATGCACTTTATGGATATTTTTCAACAAGATATAAGATTTTAATAAATGTTCCAATGG
TATTTATAACTTCTTTAGGATACATGGCATTACCTGCAATATCAAGAGCATATGCTTTAAAAGATAAAAAAGAGATAAAA
AGTAAGATTAATTTCTCTATGAGAGTTACATATCTTTTATCAATACCATCAGCCTTTGGATTAGCTTTATTAAGTGAAAA
TATATATAGATATATTTTTGCAGATTCAAATGGATATAAGATGATGGTAATAGGTGCCGCTATGATACCATTAACGGCAA
TAGTTCTTATGCAAAATGTAATACTTCAAAGTGTAAGTCAATTTTACTATGTATTATTTACCTTAGCTCTTAGTATTGTA
GTGAAGTTTACATTAAATATGACTTTAGTTGCAAATCCAGATATAAATATTTATGGAGCTGTAATTTCTGGAATGGTGGC
TTTCGTAATTTCTTTAGTACTTAATCACTTTAGAATGAAAAAAACATTAAAGATGAAAATATCAATGTTAAAGTATGCAT
TAAAACCTTTATTAGCATCAATATACATGGGTATAGGAATAATACTTAGCAAATATGTAATATCTTTATTTATAGATTTT
GATAAGTTAAGTTTAATATTAGGCATAGCTATATTACTAGTAATTATAGCTATAGGTGCATTTATGTATCTTCATGCTAT
TATAATTCTAGGAGGAATTAAAAAGGAAGATATAGAAGAAATTTCACCTAAACTTTTAAGAGTTATGCCAAGATTTTTAA
GAAAAAATATAAAATAA

Upstream 100 bases:

>100_bases
AAAAAATAAAACTATAGCTCAGGGATTACCTCCAATGTTTAAAAAGATAAAGAAGGATGTATTTAAATTTAGGATTTAGT
TTTTAAGATAGGAGATTTTT

Downstream 100 bases:

>100_bases
TAAAAAGTAAGGTATCTATAGTGTGATACCTTACTTTTTTATTTTTACTTTCTAAATAATTTTAAGATTTCATTTATTGC
AAATGGAATTAAGGATACAA

Product: stage V sporulation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MKEQSITKGFAILSIASIVAKLLSLIYVPFLTRIVGSVGMGIYGKTYDIFVFVYALTNVGLQTAISKYVSELDAVGNYKD
ALRAFKISRAFLLVVGTIFTIVLMLSANFIASMSQTPQMVYPIIFLAPTIMITTVLVTYKGYFQGRSQATPIAIATVIEQ
VANVFLSLLCAYFLIKKSVSLGVAGGTVGSSAGALMAVLYLIYIYNIYGVEKEAKRKQEPGVRRITGKKIARTLFKYGLP
ITLSTGLQNLGNIIDMLTVSNRLVDAANFSQSDANALYGYFSTRYKILINVPMVFITSLGYMALPAISRAYALKDKKEIK
SKINFSMRVTYLLSIPSAFGLALLSENIYRYIFADSNGYKMMVIGAAMIPLTAIVLMQNVILQSVSQFYYVLFTLALSIV
VKFTLNMTLVANPDINIYGAVISGMVAFVISLVLNHFRMKKTLKMKISMLKYALKPLLASIYMGIGIILSKYVISLFIDF
DKLSLILGIAILLVIIAIGAFMYLHAIIILGGIKKEDIEEISPKLLRVMPRFLRKNIK

Sequences:

>Translated_538_residues
MKEQSITKGFAILSIASIVAKLLSLIYVPFLTRIVGSVGMGIYGKTYDIFVFVYALTNVGLQTAISKYVSELDAVGNYKD
ALRAFKISRAFLLVVGTIFTIVLMLSANFIASMSQTPQMVYPIIFLAPTIMITTVLVTYKGYFQGRSQATPIAIATVIEQ
VANVFLSLLCAYFLIKKSVSLGVAGGTVGSSAGALMAVLYLIYIYNIYGVEKEAKRKQEPGVRRITGKKIARTLFKYGLP
ITLSTGLQNLGNIIDMLTVSNRLVDAANFSQSDANALYGYFSTRYKILINVPMVFITSLGYMALPAISRAYALKDKKEIK
SKINFSMRVTYLLSIPSAFGLALLSENIYRYIFADSNGYKMMVIGAAMIPLTAIVLMQNVILQSVSQFYYVLFTLALSIV
VKFTLNMTLVANPDINIYGAVISGMVAFVISLVLNHFRMKKTLKMKISMLKYALKPLLASIYMGIGIILSKYVISLFIDF
DKLSLILGIAILLVIIAIGAFMYLHAIIILGGIKKEDIEEISPKLLRVMPRFLRKNIK
>Mature_538_residues
MKEQSITKGFAILSIASIVAKLLSLIYVPFLTRIVGSVGMGIYGKTYDIFVFVYALTNVGLQTAISKYVSELDAVGNYKD
ALRAFKISRAFLLVVGTIFTIVLMLSANFIASMSQTPQMVYPIIFLAPTIMITTVLVTYKGYFQGRSQATPIAIATVIEQ
VANVFLSLLCAYFLIKKSVSLGVAGGTVGSSAGALMAVLYLIYIYNIYGVEKEAKRKQEPGVRRITGKKIARTLFKYGLP
ITLSTGLQNLGNIIDMLTVSNRLVDAANFSQSDANALYGYFSTRYKILINVPMVFITSLGYMALPAISRAYALKDKKEIK
SKINFSMRVTYLLSIPSAFGLALLSENIYRYIFADSNGYKMMVIGAAMIPLTAIVLMQNVILQSVSQFYYVLFTLALSIV
VKFTLNMTLVANPDINIYGAVISGMVAFVISLVLNHFRMKKTLKMKISMLKYALKPLLASIYMGIGIILSKYVISLFIDF
DKLSLILGIAILLVIIAIGAFMYLHAIIILGGIKKEDIEEISPKLLRVMPRFLRKNIK

Specific function: May play a role in cell division, although it is not essential for growth [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Note=Localizes at the septum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 59404; Mature: 59404

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEQSITKGFAILSIASIVAKLLSLIYVPFLTRIVGSVGMGIYGKTYDIFVFVYALTNVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
LQTAISKYVSELDAVGNYKDALRAFKISRAFLLVVGTIFTIVLMLSANFIASMSQTPQMV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YPIIFLAPTIMITTVLVTYKGYFQGRSQATPIAIATVIEQVANVFLSLLCAYFLIKKSVS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVAGGTVGSSAGALMAVLYLIYIYNIYGVEKEAKRKQEPGVRRITGKKIARTLFKYGLP
CEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
ITLSTGLQNLGNIIDMLTVSNRLVDAANFSQSDANALYGYFSTRYKILINVPMVFITSLG
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHH
YMALPAISRAYALKDKKEIKSKINFSMRVTYLLSIPSAFGLALLSENIYRYIFADSNGYK
HHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHCHHHHHHHHHHHHHHEEEEECCCCCE
MMVIGAAMIPLTAIVLMQNVILQSVSQFYYVLFTLALSIVVKFTLNMTLVANPDINIYGA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHH
VISGMVAFVISLVLNHFRMKKTLKMKISMLKYALKPLLASIYMGIGIILSKYVISLFIDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLSLILGIAILLVIIAIGAFMYLHAIIILGGIKKEDIEEISPKLLRVMPRFLRKNIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKEQSITKGFAILSIASIVAKLLSLIYVPFLTRIVGSVGMGIYGKTYDIFVFVYALTNVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
LQTAISKYVSELDAVGNYKDALRAFKISRAFLLVVGTIFTIVLMLSANFIASMSQTPQMV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YPIIFLAPTIMITTVLVTYKGYFQGRSQATPIAIATVIEQVANVFLSLLCAYFLIKKSVS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVAGGTVGSSAGALMAVLYLIYIYNIYGVEKEAKRKQEPGVRRITGKKIARTLFKYGLP
CEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
ITLSTGLQNLGNIIDMLTVSNRLVDAANFSQSDANALYGYFSTRYKILINVPMVFITSLG
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHH
YMALPAISRAYALKDKKEIKSKINFSMRVTYLLSIPSAFGLALLSENIYRYIFADSNGYK
HHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHCHHHHHHHHHHHHHHEEEEECCCCCE
MMVIGAAMIPLTAIVLMQNVILQSVSQFYYVLFTLALSIVVKFTLNMTLVANPDINIYGA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHH
VISGMVAFVISLVLNHFRMKKTLKMKISMLKYALKPLLASIYMGIGIILSKYVISLFIDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLSLILGIAILLVIIAIGAFMYLHAIIILGGIKKEDIEEISPKLLRVMPRFLRKNIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]