| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310155
Identifier: 18310155
GI number: 18310155
Start: 1370990
End: 1371418
Strand: Direct
Name: 18310155
Synonym: CPE1173
Alternate gene names: NA
Gene position: 1370990-1371418 (Clockwise)
Preceding gene: 18310151
Following gene: 18310157
Centisome position: 45.23
GC content: 30.07
Gene sequence:
>429_bases TTGTTCATCTTGGAGATAGTATGGTTCTTTATAGCAGCAGCCTTATTAGGGAAAAAGCGTGGAGCTTTAGCTAGTGGTAT AGGAATGGCTCTTGTGGATTTATATAGTGGATATATAATTTGGGCACCTTTTACATTTATAATAAAAGCTCTAATGGCAT ATATAGCTGGAGCTATTTTAGAGTATAATCATAGAAAAAGTTATTTAGTACCATTTTTAATTTCTGGTATATTTATGGTT GTAGCTTATTTCTTATCTGGTGCAATAATAGCATTTTTATTTACAGGAAGCTCTAATACCATAATAGGAGCTTTAGTATA TTCAGCAAAGGATATAATAGGTAATATACTTCAAGTTGGGGTTGGTATAGTTATAGCCTTACCTCTTTCAAAAATATTAT ATAAACAAGAAAATAAAGTCTTTAATTAG
Upstream 100 bases:
>100_bases AACACTAACAGTAAATTTCATAAGACAGTTTTTACAGCACTAATGATTGCAATAATATTTATATCAGCAAATTTAATAAG AATTCCTACTGTAGGAGGCT
Downstream 100 bases:
>100_bases AGTTTTTATTTAAATATAAAAAACAAAAGAGGATGCACATTTAACATTTAATACATCCTCTTTTTTTACATATAATTATT CCATTATTAATTTAACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MFILEIVWFFIAAALLGKKRGALASGIGMALVDLYSGYIIWAPFTFIIKALMAYIAGAILEYNHRKSYLVPFLISGIFMV VAYFLSGAIIAFLFTGSSNTIIGALVYSAKDIIGNILQVGVGIVIALPLSKILYKQENKVFN
Sequences:
>Translated_142_residues MFILEIVWFFIAAALLGKKRGALASGIGMALVDLYSGYIIWAPFTFIIKALMAYIAGAILEYNHRKSYLVPFLISGIFMV VAYFLSGAIIAFLFTGSSNTIIGALVYSAKDIIGNILQVGVGIVIALPLSKILYKQENKVFN >Mature_142_residues MFILEIVWFFIAAALLGKKRGALASGIGMALVDLYSGYIIWAPFTFIIKALMAYIAGAILEYNHRKSYLVPFLISGIFMV VAYFLSGAIIAFLFTGSSNTIIGALVYSAKDIIGNILQVGVGIVIALPLSKILYKQENKVFN
Specific function: Unknown
COG id: COG4720
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15492; Mature: 15492
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFILEIVWFFIAAALLGKKRGALASGIGMALVDLYSGYIIWAPFTFIIKALMAYIAGAIL CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHH EYNHRKSYLVPFLISGIFMVVAYFLSGAIIAFLFTGSSNTIIGALVYSAKDIIGNILQVG HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VGIVIALPLSKILYKQENKVFN HHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFILEIVWFFIAAALLGKKRGALASGIGMALVDLYSGYIIWAPFTFIIKALMAYIAGAIL CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHH EYNHRKSYLVPFLISGIFMVVAYFLSGAIIAFLFTGSSNTIIGALVYSAKDIIGNILQVG HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VGIVIALPLSKILYKQENKVFN HHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA