| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310157
Identifier: 18310157
GI number: 18310157
Start: 1372431
End: 1372658
Strand: Direct
Name: 18310157
Synonym: CPE1175
Alternate gene names: NA
Gene position: 1372431-1372658 (Clockwise)
Preceding gene: 18310155
Following gene: 18310170
Centisome position: 45.27
GC content: 29.39
Gene sequence:
>228_bases ATGAATAAAGTAATTAGATTTGCCAATCAAAAGGACTTAAAGGCTACTATGGAATTTGATTTACACAAAAATGAAGAGGT TATTTCTAACAAAATAGATATGAAGGAAGTTATAGTAGCTGAATTAGACAATAAAGTTGTAGGTTGTCTAAAAATAGAGT ATATATGGACTCATATACCTTTTATAAGCTATATAGTGGTTAGGATGGACTTAGAGGTTCTGGAATAG
Upstream 100 bases:
>100_bases ATATAATATATTGTAATAAAAAAAATTAAATAAATCATTATTTAATTTTAAATAATTGTAATATAATTATTTAAAAGAAA TAACAAGGGGGCTAAATTAA
Downstream 100 bases:
>100_bases GTGAAAGCCTTTTAAACTTTTTAGAGGGGTATTTAAAGAAAGAAAAAAATTCTGAGTTTTTATTAAGCTCTTCAATGACT GATGCTACAAAAGCTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MNKVIRFANQKDLKATMEFDLHKNEEVISNKIDMKEVIVAELDNKVVGCLKIEYIWTHIPFISYIVVRMDLEVLE
Sequences:
>Translated_75_residues MNKVIRFANQKDLKATMEFDLHKNEEVISNKIDMKEVIVAELDNKVVGCLKIEYIWTHIPFISYIVVRMDLEVLE >Mature_75_residues MNKVIRFANQKDLKATMEFDLHKNEEVISNKIDMKEVIVAELDNKVVGCLKIEYIWTHIPFISYIVVRMDLEVLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8853; Mature: 8853
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVIRFANQKDLKATMEFDLHKNEEVISNKIDMKEVIVAELDNKVVGCLKIEYIWTHIP CCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHCCCEEEEEEEEHHHHHHH FISYIVVRMDLEVLE HHHHHHHHHHHHHCC >Mature Secondary Structure MNKVIRFANQKDLKATMEFDLHKNEEVISNKIDMKEVIVAELDNKVVGCLKIEYIWTHIP CCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHCCCEEEEEEEEHHHHHHH FISYIVVRMDLEVLE HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA