Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yyaS [H]

Identifier: 18310151

GI number: 18310151

Start: 1368302

End: 1368946

Strand: Direct

Name: yyaS [H]

Synonym: CPE1169

Alternate gene names: 18310151

Gene position: 1368302-1368946 (Clockwise)

Preceding gene: 18310149

Following gene: 18310155

Centisome position: 45.14

GC content: 30.54

Gene sequence:

>645_bases
ATGAAAAAAGAAAAATTTATTCCTAAGCTTATATTTTTCTTATTAGGAATGGCAATTATACAATTAGGTGTTGTAATATT
CTTATTAAGTGGAGCTGGATCAGATCCATTTACTGTATTTACTCAAGGGCTTTCAAAAGCATTAAGCGTTTCAACTGGAA
CTGCTAACATGATAATACTTGTTACTTTAGTTATTGCAATCTTCATTGCAGATAGAAAACAACTTAAAGTTGGAACTTTT
GTACTTGTTTTAGTAGTAGGCCCTACTATAGATGCAATCATGGGAATATTACATAGATTTGGTTTAGATACTTCACTTAG
TAACTTTAACTTATTTACAAAATGCGTAATTGTAGCTGTAAGCTGTATTATAATAGCTATAGGATTTTCATTCTTAGTTA
GTACTGAATTAGGAGTTGCACCAAACGATTTAGTTCCTCTTATAATAAGAGATAAAACTAATTTCCAATACCGTTGGATA
CGTATCGGTTTAGATTTAAGTTTCCTAGTAGTTGGTTATTTACTAGCTGGTGTTGTAGGTCTTGGAACAATAATAGCAGT
ACTTTTCACAGGTCCAGCTATACAATTTTTTATGCCACCATGTGAAAAAATTGTACATAAATTTATAGGTAAAAATGCTG
CTTAA

Upstream 100 bases:

>100_bases
TTGTTTGGTTTTCTTTTAAGTTTTTAAATACACATTAAATATTTAAATTCACATTCAAAAATACGATTCACAAAACTCAA
AAACAAGGAGTGTATTAAAA

Downstream 100 bases:

>100_bases
TAATAGAAAACAGTCCATATGGACTGTTTTTTTTATATTTCTTGATATCTAGCTATAAGTTCTACTAATTCATCACAGAA
AGCATCATACTTTTCTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKKEKFIPKLIFFLLGMAIIQLGVVIFLLSGAGSDPFTVFTQGLSKALSVSTGTANMIILVTLVIAIFIADRKQLKVGTF
VLVLVVGPTIDAIMGILHRFGLDTSLSNFNLFTKCVIVAVSCIIIAIGFSFLVSTELGVAPNDLVPLIIRDKTNFQYRWI
RIGLDLSFLVVGYLLAGVVGLGTIIAVLFTGPAIQFFMPPCEKIVHKFIGKNAA

Sequences:

>Translated_214_residues
MKKEKFIPKLIFFLLGMAIIQLGVVIFLLSGAGSDPFTVFTQGLSKALSVSTGTANMIILVTLVIAIFIADRKQLKVGTF
VLVLVVGPTIDAIMGILHRFGLDTSLSNFNLFTKCVIVAVSCIIIAIGFSFLVSTELGVAPNDLVPLIIRDKTNFQYRWI
RIGLDLSFLVVGYLLAGVVGLGTIIAVLFTGPAIQFFMPPCEKIVHKFIGKNAA
>Mature_214_residues
MKKEKFIPKLIFFLLGMAIIQLGVVIFLLSGAGSDPFTVFTQGLSKALSVSTGTANMIILVTLVIAIFIADRKQLKVGTF
VLVLVVGPTIDAIMGILHRFGLDTSLSNFNLFTKCVIVAVSCIIIAIGFSFLVSTELGVAPNDLVPLIIRDKTNFQYRWI
RIGLDLSFLVVGYLLAGVVGLGTIIAVLFTGPAIQFFMPPCEKIVHKFIGKNAA

Specific function: Unknown

COG id: COG2364

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740 [H]

Pfam domain/function: PF02588 DUF161 [H]

EC number: NA

Molecular weight: Translated: 23107; Mature: 23107

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEKFIPKLIFFLLGMAIIQLGVVIFLLSGAGSDPFTVFTQGLSKALSVSTGTANMIIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
VTLVIAIFIADRKQLKVGTFVLVLVVGPTIDAIMGILHRFGLDTSLSNFNLFTKCVIVAV
HHHHHHHHHHCCHHHHHHHHHEEEHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SCIIIAIGFSFLVSTELGVAPNDLVPLIIRDKTNFQYRWIRIGLDLSFLVVGYLLAGVVG
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH
LGTIIAVLFTGPAIQFFMPPCEKIVHKFIGKNAA
HHHHHHHHHCCCHHEEECCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKEKFIPKLIFFLLGMAIIQLGVVIFLLSGAGSDPFTVFTQGLSKALSVSTGTANMIIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
VTLVIAIFIADRKQLKVGTFVLVLVVGPTIDAIMGILHRFGLDTSLSNFNLFTKCVIVAV
HHHHHHHHHHCCHHHHHHHHHEEEHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SCIIIAIGFSFLVSTELGVAPNDLVPLIIRDKTNFQYRWIRIGLDLSFLVVGYLLAGVVG
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH
LGTIIAVLFTGPAIQFFMPPCEKIVHKFIGKNAA
HHHHHHHHHCCCHHEEECCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]