Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18310146

Identifier: 18310146

GI number: 18310146

Start: 1362882

End: 1363100

Strand: Reverse

Name: 18310146

Synonym: CPE1164

Alternate gene names: NA

Gene position: 1363100-1362882 (Counterclockwise)

Preceding gene: 18310148

Following gene: 18310145

Centisome position: 44.97

GC content: 31.05

Gene sequence:

>219_bases
ATGTCAGATTCTATAGTTAAAGTAAAAAAGAATAGTAATGGAGAAATTACAGATTACGTTTTAAGTAGTGGAAAGACTGT
TTCTAAAGCTGAAGGTGTAAAGCTTGCAGAAGAGGGAATGATAGATGGAGTAATAATTTCTCATTCAAAGAAAGGGGAAG
CTTATTTAAGAAGTATTCCTGATGGAAAAGAAAGTAACAACTTAGACGAATTATCATAA

Upstream 100 bases:

>100_bases
TAAACCTTTTATAATTTAATTATAACAAATAAAAATGGTTTTTTACAGGGAATATTTTTTAAAAAAGTATGCAAAATAAT
AGTAAAGGAAGGTGATAATC

Downstream 100 bases:

>100_bases
TAAAAAAATTGCAATATGCTTATATTATAATGAAGATAGCTAAATTTAAGTTATCTTCATTATTTTGCATTCTAATATCT
AAATACGATATTAGAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSDSIVKVKKNSNGEITDYVLSSGKTVSKAEGVKLAEEGMIDGVIISHSKKGEAYLRSIPDGKESNNLDELS

Sequences:

>Translated_72_residues
MSDSIVKVKKNSNGEITDYVLSSGKTVSKAEGVKLAEEGMIDGVIISHSKKGEAYLRSIPDGKESNNLDELS
>Mature_71_residues
SDSIVKVKKNSNGEITDYVLSSGKTVSKAEGVKLAEEGMIDGVIISHSKKGEAYLRSIPDGKESNNLDELS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7699; Mature: 7568

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSIVKVKKNSNGEITDYVLSSGKTVSKAEGVKLAEEGMIDGVIISHSKKGEAYLRSIP
CCCCEEEEEECCCCCEEEEEECCCCEECCCCCCEECCCCCCCCEEEECCCCCCHHHHCCC
DGKESNNLDELS
CCCCCCCCCCCC
>Mature Secondary Structure 
SDSIVKVKKNSNGEITDYVLSSGKTVSKAEGVKLAEEGMIDGVIISHSKKGEAYLRSIP
CCCEEEEEECCCCCEEEEEECCCCEECCCCCCEECCCCCCCCEEEECCCCCCHHHHCCC
DGKESNNLDELS
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA