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The map label for this gene is ynbB [H]

Identifier: 18310141

GI number: 18310141

Start: 1357128

End: 1358408

Strand: Direct

Name: ynbB [H]

Synonym: CPE1159

Alternate gene names: 18310141

Gene position: 1357128-1358408 (Clockwise)

Preceding gene: 18310140

Following gene: 18310142

Centisome position: 44.77

GC content: 31.07

Gene sequence:

>1281_bases
ATGCTTAATGCAACTATAGAATTACTAAAAAAACAATATGGTTTCACAGATGAAACTATAAAGCTTTATAATCAAGCTAT
AATTGATGTAGAAAATGAATTTAAAATATATGATGAAATAAGAGAATATAATCAATTAAAAGTTCTTAAGGCTTTCCAAG
AGGAAAGAATTTCAGATAATCATTTTACTAATTCAACAGGATATGGTTATGGTGATATTGGAAGAGATACTTTAGATTTA
GTTTATGCTAGAATCTTTAATGCTGAAAAAGCTTTAGTTAGACCACATTTTGTTAATGGAACTCATGCTTTAGGAACAGC
TTTATTTGGGAACTTAAGACCTGGAGATACTATATTAGCTGTTACTGGTAGTCCTTATGATACTTTACATAGTGTAATTG
GTATAAGCGGAGAAGAAAATATAGGCTCTTTAAAAGAGTATGGTGTTAATTATAAGCAAGTAGATCTTGTAGATGGAAAG
ATTAATATAGAAAAAGCTTTAGAAATGATTAAAGAAGATGAATCAATAAAATTAATACATATGCAAAGATCAACTGGATA
CGGCTGGAGAAATGCTTTCCAAGTTAAAGAATTAGGAGAAGCAATAAAAGCTATAAAAGAATTAAGAGAAGACTTAATAG
TATTTGTTGATAATTGTTATGGAGAGTTTATAGACATAATAGAACCTACAGATGTTGGTGCTGATTTAATAGCAGGATCA
TTAATTAAAAACATAGGTGGAGGAATAGCTCCAACTGGTGGATACATAGTAGGAAAAGAAAAATATGTAGAGCAAGCGTC
TTATAGACTTACTGTACCTGGTATAGGAGCTGAGTGTGGATGTACATTTGGAGTGATGAAAGATTTCTACCAAGGATTAT
TCTTATCTCCTCATGTTGCTATAGAAGCATTAAAAGGAGCAATATTCTGTGCTAGAATAATGGAACTTGCTGGATTTGAA
GTTCTTCCTAAATATAATGATAAGAGAAGTGACATAATTCAGGCTATAAAATTCAATGATAAAGAAAAACTTATAAAATT
CTGTAAGGGTGTTCAATATGCTTCGCCAATAGATTCTTTCGTTGAATGTGAACCATGGGCTATGCCAGGGTATTCAGATG
AGGTTATTATGGCAGCTGGTGCCTTCATTCAAGGTTCTTCTATAGAACTTTCAGCAGATGCACCTATAAGAGAGCCATAT
ATAGCTTATTTACAAGGTGGATTAACTTTTGACCATGCTAAAATAGGTGTATTAATAGCTTTAAATAACATTTTTAAATA
A

Upstream 100 bases:

>100_bases
AGAAAAGAAAAATAGGTAAACCCTAGATGGTTTGCCTATTTTTTTTCTATATGATAAGATTTATAAATGTACGATATTTT
AATAATGCGGGGGTATAATA

Downstream 100 bases:

>100_bases
TATGCTAATTTAAATTAGTAAATACAAAAATTAACATAGGCTTTTATCAAAAAATAATAAGATTTACAAAGATATTTCTT
TAAAATTATTTACTTTAAAT

Product: aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MLNATIELLKKQYGFTDETIKLYNQAIIDVENEFKIYDEIREYNQLKVLKAFQEERISDNHFTNSTGYGYGDIGRDTLDL
VYARIFNAEKALVRPHFVNGTHALGTALFGNLRPGDTILAVTGSPYDTLHSVIGISGEENIGSLKEYGVNYKQVDLVDGK
INIEKALEMIKEDESIKLIHMQRSTGYGWRNAFQVKELGEAIKAIKELREDLIVFVDNCYGEFIDIIEPTDVGADLIAGS
LIKNIGGGIAPTGGYIVGKEKYVEQASYRLTVPGIGAECGCTFGVMKDFYQGLFLSPHVAIEALKGAIFCARIMELAGFE
VLPKYNDKRSDIIQAIKFNDKEKLIKFCKGVQYASPIDSFVECEPWAMPGYSDEVIMAAGAFIQGSSIELSADAPIREPY
IAYLQGGLTFDHAKIGVLIALNNIFK

Sequences:

>Translated_426_residues
MLNATIELLKKQYGFTDETIKLYNQAIIDVENEFKIYDEIREYNQLKVLKAFQEERISDNHFTNSTGYGYGDIGRDTLDL
VYARIFNAEKALVRPHFVNGTHALGTALFGNLRPGDTILAVTGSPYDTLHSVIGISGEENIGSLKEYGVNYKQVDLVDGK
INIEKALEMIKEDESIKLIHMQRSTGYGWRNAFQVKELGEAIKAIKELREDLIVFVDNCYGEFIDIIEPTDVGADLIAGS
LIKNIGGGIAPTGGYIVGKEKYVEQASYRLTVPGIGAECGCTFGVMKDFYQGLFLSPHVAIEALKGAIFCARIMELAGFE
VLPKYNDKRSDIIQAIKFNDKEKLIKFCKGVQYASPIDSFVECEPWAMPGYSDEVIMAAGAFIQGSSIELSADAPIREPY
IAYLQGGLTFDHAKIGVLIALNNIFK
>Mature_426_residues
MLNATIELLKKQYGFTDETIKLYNQAIIDVENEFKIYDEIREYNQLKVLKAFQEERISDNHFTNSTGYGYGDIGRDTLDL
VYARIFNAEKALVRPHFVNGTHALGTALFGNLRPGDTILAVTGSPYDTLHSVIGISGEENIGSLKEYGVNYKQVDLVDGK
INIEKALEMIKEDESIKLIHMQRSTGYGWRNAFQVKELGEAIKAIKELREDLIVFVDNCYGEFIDIIEPTDVGADLIAGS
LIKNIGGGIAPTGGYIVGKEKYVEQASYRLTVPGIGAECGCTFGVMKDFYQGLFLSPHVAIEALKGAIFCARIMELAGFE
VLPKYNDKRSDIIQAIKFNDKEKLIKFCKGVQYASPIDSFVECEPWAMPGYSDEVIMAAGAFIQGSSIELSADAPIREPY
IAYLQGGLTFDHAKIGVLIALNNIFK

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 47232; Mature: 47232

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNATIELLKKQYGFTDETIKLYNQAIIDVENEFKIYDEIREYNQLKVLKAFQEERISDN
CCCHHHHHHHHHHCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HFTNSTGYGYGDIGRDTLDLVYARIFNAEKALVRPHFVNGTHALGTALFGNLRPGDTILA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCEECCCHHHHHHHHHCCCCCCCEEEE
VTGSPYDTLHSVIGISGEENIGSLKEYGVNYKQVDLVDGKINIEKALEMIKEDESIKLIH
EECCCHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEE
MQRSTGYGWRNAFQVKELGEAIKAIKELREDLIVFVDNCYGEFIDIIEPTDVGADLIAGS
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCCCCCCCCHHHHHHH
LIKNIGGGIAPTGGYIVGKEKYVEQASYRLTVPGIGAECGCTFGVMKDFYQGLFLSPHVA
HHHHHCCCCCCCCCEEECHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHH
IEALKGAIFCARIMELAGFEVLPKYNDKRSDIIQAIKFNDKEKLIKFCKGVQYASPIDSF
HHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH
VECEPWAMPGYSDEVIMAAGAFIQGSSIELSADAPIREPYIAYLQGGLTFDHAKIGVLIA
HCCCCCCCCCCCCCEEEEECCEEECCCEEEECCCCCCCCHHHHHHCCCEECCCCEEEEEE
LNNIFK
ECHHCC
>Mature Secondary Structure
MLNATIELLKKQYGFTDETIKLYNQAIIDVENEFKIYDEIREYNQLKVLKAFQEERISDN
CCCHHHHHHHHHHCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HFTNSTGYGYGDIGRDTLDLVYARIFNAEKALVRPHFVNGTHALGTALFGNLRPGDTILA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCEECCCHHHHHHHHHCCCCCCCEEEE
VTGSPYDTLHSVIGISGEENIGSLKEYGVNYKQVDLVDGKINIEKALEMIKEDESIKLIH
EECCCHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEE
MQRSTGYGWRNAFQVKELGEAIKAIKELREDLIVFVDNCYGEFIDIIEPTDVGADLIAGS
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCCCCCCCCHHHHHHH
LIKNIGGGIAPTGGYIVGKEKYVEQASYRLTVPGIGAECGCTFGVMKDFYQGLFLSPHVA
HHHHHCCCCCCCCCEEECHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHH
IEALKGAIFCARIMELAGFEVLPKYNDKRSDIIQAIKFNDKEKLIKFCKGVQYASPIDSF
HHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH
VECEPWAMPGYSDEVIMAAGAFIQGSSIELSADAPIREPYIAYLQGGLTFDHAKIGVLIA
HCCCCCCCCCCCCCEEEEECCEEECCCEEEECCCCCCCCHHHHHHCCCEECCCCEEEEEE
LNNIFK
ECHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]