| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310142
Identifier: 18310142
GI number: 18310142
Start: 1358667
End: 1359572
Strand: Direct
Name: 18310142
Synonym: CPE1160
Alternate gene names: NA
Gene position: 1358667-1359572 (Clockwise)
Preceding gene: 18310141
Following gene: 18310144
Centisome position: 44.82
GC content: 27.81
Gene sequence:
>906_bases TTGGAAGAGAGCAGAAACAAAGAATTAAAAGTAAAAAGCTTTAGAGTAACTGAAGAAACTTTTGATAAATTTAAAAAAAT AGCATCTGATGAGTTTGGAAATCAAGGACAATGTTTAGATGCATTAATATCACTGTATGAATTAGAGAATTCTAAATCAA CCTTAATAGAGAGGAAGTTAGAAATAGAGTCTTTTCAAGATTATTTAAACAAAATAAACCAACTTTTCTTAACTTCTCTT CAAATGAGTGAGGATGCAGGAAAAAGAGCAGAAGAGGAGTTTGTTAAGAAGCTTTCTATAAAGGATGTGACCATAGAGAG GCTTCAAAGAAGAGAAGAGGAGCTTATAGAAAGAGATAAGACTTTAAAAGAGGATAATAAAGCTAAAACAAAGGAAATAG AAGAGCTTAAAGAAAATATAAAAACTTTAGAAAAAGATAAAAGTACTTTATCTCAATTAGTATCTAGAAACTATGATTTA ATAGAAAAAAATAAAGAAGAAATAGCCTCTTTAAAATCTTTAGAATCTTTAAAAGGTGAAAATGAAGAGTTAAGAAATAA GGGGGAAGAGGATAGAGCTTCTTTAAAAGAAAGAGAATCTCATATAAAATCTCTAGAATTAGAAAAAGAATCTCTTAAAG AAAAGCTAAATTTCTATGAAGAAAAAGAGAAGTCTTATATGGAAGAGGTAGAATCATATAAAAAGCTTGTAGAAGCTATG AGAAAGGATCATAAGAAGGAGTTAGAGTTATTAGAGACTAAATACTCTAAAATGGCAGAAAAAGAGTCTGAGAAGCTTAG AAAGGATTTTGAAAGTAGGTTAGAATTAGAGAAAAGAACCTTAGAATTAGATATAAAAACTTTAAAATATGAAAAAGAAG TTTTAGAAAGTAAGTTGAATTCATAA
Upstream 100 bases:
>100_bases CTTTTTTATAATATATAATTAAAATAGTTAATTAATTTAATATTACGTATTACATTTTATATATTACATATTGTATTACA AAGAAAGGCGGAAGGATATT
Downstream 100 bases:
>100_bases TATATGTTGATTTGTAAATTGAGTTATTAATTGGCGTCAGATAATTTGTGTAATTTAATATTCTGTATAGATTATATAGT TGAATATTTAGTAAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MEESRNKELKVKSFRVTEETFDKFKKIASDEFGNQGQCLDALISLYELENSKSTLIERKLEIESFQDYLNKINQLFLTSL QMSEDAGKRAEEEFVKKLSIKDVTIERLQRREEELIERDKTLKEDNKAKTKEIEELKENIKTLEKDKSTLSQLVSRNYDL IEKNKEEIASLKSLESLKGENEELRNKGEEDRASLKERESHIKSLELEKESLKEKLNFYEEKEKSYMEEVESYKKLVEAM RKDHKKELELLETKYSKMAEKESEKLRKDFESRLELEKRTLELDIKTLKYEKEVLESKLNS
Sequences:
>Translated_301_residues MEESRNKELKVKSFRVTEETFDKFKKIASDEFGNQGQCLDALISLYELENSKSTLIERKLEIESFQDYLNKINQLFLTSL QMSEDAGKRAEEEFVKKLSIKDVTIERLQRREEELIERDKTLKEDNKAKTKEIEELKENIKTLEKDKSTLSQLVSRNYDL IEKNKEEIASLKSLESLKGENEELRNKGEEDRASLKERESHIKSLELEKESLKEKLNFYEEKEKSYMEEVESYKKLVEAM RKDHKKELELLETKYSKMAEKESEKLRKDFESRLELEKRTLELDIKTLKYEKEVLESKLNS >Mature_301_residues MEESRNKELKVKSFRVTEETFDKFKKIASDEFGNQGQCLDALISLYELENSKSTLIERKLEIESFQDYLNKINQLFLTSL QMSEDAGKRAEEEFVKKLSIKDVTIERLQRREEELIERDKTLKEDNKAKTKEIEELKENIKTLEKDKSTLSQLVSRNYDL IEKNKEEIASLKSLESLKGENEELRNKGEEDRASLKERESHIKSLELEKESLKEKLNFYEEKEKSYMEEVESYKKLVEAM RKDHKKELELLETKYSKMAEKESEKLRKDFESRLELEKRTLELDIKTLKYEKEVLESKLNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35835; Mature: 35835
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEESRNKELKVKSFRVTEETFDKFKKIASDEFGNQGQCLDALISLYELENSKSTLIERKL CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH EIESFQDYLNKINQLFLTSLQMSEDAGKRAEEEFVKKLSIKDVTIERLQRREEELIERDK HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLKEDNKAKTKEIEELKENIKTLEKDKSTLSQLVSRNYDLIEKNKEEIASLKSLESLKGE HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCC NEELRNKGEEDRASLKERESHIKSLELEKESLKEKLNFYEEKEKSYMEEVESYKKLVEAM CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKDHKKELELLETKYSKMAEKESEKLRKDFESRLELEKRTLELDIKTLKYEKEVLESKLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC S C >Mature Secondary Structure MEESRNKELKVKSFRVTEETFDKFKKIASDEFGNQGQCLDALISLYELENSKSTLIERKL CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH EIESFQDYLNKINQLFLTSLQMSEDAGKRAEEEFVKKLSIKDVTIERLQRREEELIERDK HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLKEDNKAKTKEIEELKENIKTLEKDKSTLSQLVSRNYDLIEKNKEEIASLKSLESLKGE HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCC NEELRNKGEEDRASLKERESHIKSLELEKESLKEKLNFYEEKEKSYMEEVESYKKLVEAM CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKDHKKELELLETKYSKMAEKESEKLRKDFESRLELEKRTLELDIKTLKYEKEVLESKLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA