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The map label for this gene is qmcA [H]

Identifier: 18310042

GI number: 18310042

Start: 1267577

End: 1268527

Strand: Direct

Name: qmcA [H]

Synonym: CPE1060

Alternate gene names: 18310042

Gene position: 1267577-1268527 (Clockwise)

Preceding gene: 18310041

Following gene: 18310043

Centisome position: 41.81

GC content: 29.65

Gene sequence:

>951_bases
ATGGTAGCTACTGTAATTATTATAATCTTATTATTAATAGTGGTATTTGCAGCAATTTCATCAATCAAGGTTGTAAATAC
AGGATATGTTTATGTATTAGAACGTTTTGGACAATTTAGTAAAATTTTAGAGCCAGGTTGGCATTTAGTTATTCCTTTCG
CTGACTTTGTAAGAAAGAAAATTTCAACAAAGCAACAAATTCTAGATATACCTCCACAATATGTAATAACAAAGGATAAC
GTAAAAATTGAAATTGATAATGTTATATTCTATAAAGTATTAAATGCTAAAGATGCTGTTTATAACATAGAAGATTTTAA
ATCAGGTATAGTTTACTCAACAATAACAAACATGAGAAACATAGTAGGTAATATGTCTTTAGATGAAGTTTTATCAGGTA
GAGATAAAATAAACTTAGAGCTTTTAACAATAATAGATTCTATAACAGATGCTTATGGTATAAAAATACTTTCTGTAGAA
ATTAAAAACATAATTCCTCCAGCTGAAATTCAAGATGCCATGGAAAAACAAATGAAGGCAGAAAGAGATAAGAGAGCTAC
TATATTACAAGCTGAAGGTTTAAAACAAAGTGAAATAGCAAGAGCAGAAGCAGAAAAGCAAGCTAAAATTTTAAGAGCTG
AGGCTGAAAAAGAAGCTAATATAAGACACGCTGAAGGGTTAAAAGAATCTCAATTACTTGAAGCAGAAGGTAAGGCTAGA
GCTATTGAAGAGGTTTCAAAGGCAGAAGCTGCAGCTATTGAAAGAATAAATACTTCAATAATTGAATCTGGAACTAACGA
AGTAGTAATTGCTTTAAAACAAGTTGAAGCATTAAAAGAAATGGCAGCAAACCCAGCTAACAAGCTTATTTTACCTAATG
AAGCAGTTTCTTCTTTAGGAAGTATAGCAGCTATTGCTGATATTTTAAAAGAAAATAAAGAGAATAAATAA

Upstream 100 bases:

>100_bases
AGTGTTAGTGGACCATTAAAGAAAGGGACAGAAGTCGAGATCATAGGAATAGAAGGAAATAAAATTCTAATAAAAAAATA
AAAACTAGGAGGGGTTACTC

Downstream 100 bases:

>100_bases
TTATTATTAGGAATATACTATTTTTGAGTCTTTAAAAAGGCTTACGTAGGCATTAATTTTTCCCTTTGCTTTAAAGAGTA
AAGGGATTTTTTTATTTAGG

Product: SPFH domain protein/band 7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MVATVIIIILLLIVVFAAISSIKVVNTGYVYVLERFGQFSKILEPGWHLVIPFADFVRKKISTKQQILDIPPQYVITKDN
VKIEIDNVIFYKVLNAKDAVYNIEDFKSGIVYSTITNMRNIVGNMSLDEVLSGRDKINLELLTIIDSITDAYGIKILSVE
IKNIIPPAEIQDAMEKQMKAERDKRATILQAEGLKQSEIARAEAEKQAKILRAEAEKEANIRHAEGLKESQLLEAEGKAR
AIEEVSKAEAAAIERINTSIIESGTNEVVIALKQVEALKEMAANPANKLILPNEAVSSLGSIAAIADILKENKENK

Sequences:

>Translated_316_residues
MVATVIIIILLLIVVFAAISSIKVVNTGYVYVLERFGQFSKILEPGWHLVIPFADFVRKKISTKQQILDIPPQYVITKDN
VKIEIDNVIFYKVLNAKDAVYNIEDFKSGIVYSTITNMRNIVGNMSLDEVLSGRDKINLELLTIIDSITDAYGIKILSVE
IKNIIPPAEIQDAMEKQMKAERDKRATILQAEGLKQSEIARAEAEKQAKILRAEAEKEANIRHAEGLKESQLLEAEGKAR
AIEEVSKAEAAAIERINTSIIESGTNEVVIALKQVEALKEMAANPANKLILPNEAVSSLGSIAAIADILKENKENK
>Mature_316_residues
MVATVIIIILLLIVVFAAISSIKVVNTGYVYVLERFGQFSKILEPGWHLVIPFADFVRKKISTKQQILDIPPQYVITKDN
VKIEIDNVIFYKVLNAKDAVYNIEDFKSGIVYSTITNMRNIVGNMSLDEVLSGRDKINLELLTIIDSITDAYGIKILSVE
IKNIIPPAEIQDAMEKQMKAERDKRATILQAEGLKQSEIARAEAEKQAKILRAEAEKEANIRHAEGLKESQLLEAEGKAR
AIEEVSKAEAAAIERINTSIIESGTNEVVIALKQVEALKEMAANPANKLILPNEAVSSLGSIAAIADILKENKENK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=196, Percent_Identity=39.2857142857143, Blast_Score=161, Evalue=9e-40,
Organism=Homo sapiens, GI21686995, Length=224, Percent_Identity=31.25, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI221316744, Length=223, Percent_Identity=30.9417040358744, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI38016911, Length=224, Percent_Identity=32.5892857142857, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI7657615, Length=190, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1786697, Length=316, Percent_Identity=41.4556962025316, Blast_Score=248, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI32564147, Length=291, Percent_Identity=33.6769759450172, Blast_Score=153, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI17569499, Length=210, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25153583, Length=233, Percent_Identity=30.4721030042918, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17570459, Length=160, Percent_Identity=37.5, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71987612, Length=233, Percent_Identity=30.4721030042918, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71987621, Length=233, Percent_Identity=30.0429184549356, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17569493, Length=190, Percent_Identity=28.4210526315789, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI193209764, Length=193, Percent_Identity=27.979274611399, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI32566490, Length=160, Percent_Identity=34.375, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17569497, Length=193, Percent_Identity=26.9430051813472, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71989948, Length=161, Percent_Identity=30.4347826086957, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI71989955, Length=161, Percent_Identity=30.4347826086957, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17570161, Length=226, Percent_Identity=29.646017699115, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193210507, Length=226, Percent_Identity=29.646017699115, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI45550506, Length=196, Percent_Identity=37.7551020408163, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI21356845, Length=219, Percent_Identity=24.6575342465753, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24657857, Length=203, Percent_Identity=32.0197044334975, Blast_Score=95, Evalue=7e-20,
Organism=Drosophila melanogaster, GI281365664, Length=203, Percent_Identity=32.0197044334975, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI62484448, Length=203, Percent_Identity=32.0197044334975, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI62484274, Length=203, Percent_Identity=32.0197044334975, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281361631, Length=224, Percent_Identity=25.8928571428571, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281361633, Length=224, Percent_Identity=25.8928571428571, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI45556022, Length=209, Percent_Identity=29.6650717703349, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI18860517, Length=204, Percent_Identity=29.4117647058824, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281361635, Length=160, Percent_Identity=26.875, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI28573263, Length=200, Percent_Identity=24.5, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34965; Mature: 34965

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATVIIIILLLIVVFAAISSIKVVNTGYVYVLERFGQFSKILEPGWHLVIPFADFVRKK
CHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
ISTKQQILDIPPQYVITKDNVKIEIDNVIFYKVLNAKDAVYNIEDFKSGIVYSTITNMRN
HHHHHHHHCCCCCEEEECCCEEEEECCEEEEEECCCCHHEEEHHHHHCCHHHHHHHHHHH
IVGNMSLDEVLSGRDKINLELLTIIDSITDAYGIKILSVEIKNIIPPAEIQDAMEKQMKA
HHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEEEEHHHCCCCHHHHHHHHHHHHH
ERDKRATILQAEGLKQSEIARAEAEKQAKILRAEAEKEANIRHAEGLKESQLLEAEGKAR
HHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCHHH
AIEEVSKAEAAAIERINTSIIESGTNEVVIALKQVEALKEMAANPANKLILPNEAVSSLG
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCEECCCHHHHHHH
SIAAIADILKENKENK
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVATVIIIILLLIVVFAAISSIKVVNTGYVYVLERFGQFSKILEPGWHLVIPFADFVRKK
CHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
ISTKQQILDIPPQYVITKDNVKIEIDNVIFYKVLNAKDAVYNIEDFKSGIVYSTITNMRN
HHHHHHHHCCCCCEEEECCCEEEEECCEEEEEECCCCHHEEEHHHHHCCHHHHHHHHHHH
IVGNMSLDEVLSGRDKINLELLTIIDSITDAYGIKILSVEIKNIIPPAEIQDAMEKQMKA
HHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEEEEHHHCCCCHHHHHHHHHHHHH
ERDKRATILQAEGLKQSEIARAEAEKQAKILRAEAEKEANIRHAEGLKESQLLEAEGKAR
HHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCHHH
AIEEVSKAEAAAIERINTSIIESGTNEVVIALKQVEALKEMAANPANKLILPNEAVSSLG
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCEECCCHHHHHHH
SIAAIADILKENKENK
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]