Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310041

Identifier: 18310041

GI number: 18310041

Start: 1267144

End: 1267557

Strand: Direct

Name: 18310041

Synonym: CPE1059

Alternate gene names: NA

Gene position: 1267144-1267557 (Clockwise)

Preceding gene: 18310038

Following gene: 18310042

Centisome position: 41.8

GC content: 26.57

Gene sequence:

>414_bases
ATGTTATGGCTTTGGGTAGTAGTTATTCTAGCTGGAATAATAATAGACTATTTAAGTTCTGATGTTCTATTTGTTGGATT
TTCCTTTGGAGCTTTAGGTGGTTTAGTATTAGCATTTCTAGATGTAAATGTAATATTACAATTCATACTATTCTCCATAA
TAACAATTTTATTTTTCTTCTATGTTTATCCTAAAATTAAAAGAAAGATAAAAGTAGATAATATAGGAACAAAAACCATG
GAACAATCCTATATAGGAAGAAAAATTATATTAGATGAAAATGTAGAAGATTCAGCATTAATTAAATTTGAGGGGATTTA
TTGGACATTTAAAAGTGTTAGTGGACCATTAAAGAAAGGGACAGAAGTCGAGATCATAGGAATAGAAGGAAATAAAATTC
TAATAAAAAAATAA

Upstream 100 bases:

>100_bases
AAAGTTTAAAATAGTACTTGAAATAATAATGTATAAACTGTATAATAAAGTAAATATTAATAAAAAGTTAAGATTAATAA
AAAAAAGGAGGGGGCAAACT

Downstream 100 bases:

>100_bases
AAACTAGGAGGGGTTACTCATGGTAGCTACTGTAATTATTATAATCTTATTATTAATAGTGGTATTTGCAGCAATTTCAT
CAATCAAGGTTGTAAATACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLWLWVVVILAGIIIDYLSSDVLFVGFSFGALGGLVLAFLDVNVILQFILFSIITILFFFYVYPKIKRKIKVDNIGTKTM
EQSYIGRKIILDENVEDSALIKFEGIYWTFKSVSGPLKKGTEVEIIGIEGNKILIKK

Sequences:

>Translated_137_residues
MLWLWVVVILAGIIIDYLSSDVLFVGFSFGALGGLVLAFLDVNVILQFILFSIITILFFFYVYPKIKRKIKVDNIGTKTM
EQSYIGRKIILDENVEDSALIKFEGIYWTFKSVSGPLKKGTEVEIIGIEGNKILIKK
>Mature_137_residues
MLWLWVVVILAGIIIDYLSSDVLFVGFSFGALGGLVLAFLDVNVILQFILFSIITILFFFYVYPKIKRKIKVDNIGTKTM
EQSYIGRKIILDENVEDSALIKFEGIYWTFKSVSGPLKKGTEVEIIGIEGNKILIKK

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15514; Mature: 15514

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWLWVVVILAGIIIDYLSSDVLFVGFSFGALGGLVLAFLDVNVILQFILFSIITILFFF
CHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVYPKIKRKIKVDNIGTKTMEQSYIGRKIILDENVEDSALIKFEGIYWTFKSVSGPLKKG
HHHHHHHHEEEECCCCCHHHHHHHCCCEEEEECCCCCCEEEEEECEEEEECCCCCCCCCC
TEVEIIGIEGNKILIKK
CEEEEEEECCCEEEEEC
>Mature Secondary Structure
MLWLWVVVILAGIIIDYLSSDVLFVGFSFGALGGLVLAFLDVNVILQFILFSIITILFFF
CHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVYPKIKRKIKVDNIGTKTMEQSYIGRKIILDENVEDSALIKFEGIYWTFKSVSGPLKKG
HHHHHHHHEEEECCCCCHHHHHHHCCCEEEEECCCCCCEEEEEECEEEEECCCCCCCCCC
TEVEIIGIEGNKILIKK
CEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA