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The map label for this gene is yfcC [C]

Identifier: 18309967

GI number: 18309967

Start: 1186397

End: 1187905

Strand: Reverse

Name: yfcC [C]

Synonym: CPE0985

Alternate gene names: 18309967

Gene position: 1187905-1186397 (Counterclockwise)

Preceding gene: 18309972

Following gene: 18309966

Centisome position: 39.19

GC content: 31.21

Gene sequence:

>1509_bases
ATGAGTAAAAAGAAAAAAATTTCGTTCCCTACAGCCTTTACTGTATTATTTATTGTTTTAATTTTATCAGCTATTTTAAC
TTATGTGATTCCAGCAGGATCATATTCAAAGTTGTCTTATAATGAAGCTGAAAATACCTTTATTGTTACAAATCCTCAAG
GGGAAAGCACTAAGGAAGCTGCAACCCAAAATACCTTAGATAAACTTGGTATAAAAATAGACTTAAGTAAATTTACTGAT
GGAAGTATAAATAAGCCAATAGCTATACCAAATACTTATGAAAAGGTTGCTCAAAATCCTCAAGGTATTGCCCAAATAAT
AGAAGCTCCTATTCAAGGAACTTATGACACTATAGATATAATTATGTTCGTTTTAATAATTGGTGGAGTAATAGGAGTTT
TAAATACAACTGGAGCATTTAATGCTGGAATTGCTAGCCTTTCTAAAATAACTAAGGGAAAAGAATATATACTTATAATA
TTATTATCAATACTTATTTCTCTTGGTGGTACTACTTTTGGATTGGCAGAAGAAACAATTGCTCTTTATCCAATTCTGCT
CCCAATCTTCCTAGCTTCTGGCTATGATGCTATAGTTTGTATAGCCACAATATACATGGGTTCATCTATAGGAACAATGT
TCTCAACTGTAAACCCATTCTCTTCAGTAATAGCTTCAACAGCTGCTGGAATAAGCTTTAAAGAAGGCCTTGATTTTAGG
ATGATAGGATTAGTTTTAGCTACACTTATAACAATAATTTATATACTTAGATATGCTAAAAAAGTTAAAAACGATCCTTC
TAAATCCCTTGTATATGATCAAAAAGATGAAATAGATTCTAAATTCCTTCATGAATCTAGTAATGATGTGCCAGTATTTA
CTTGGAGACTTAAACTTATGCTTTTAATCTTCGCTGGTTCATTTATAATTTTAGTTTATGGAGTTTCAGCTAAAGGATGG
GGATTTATACAAATGACTGCTCTATTCCTTGTAGTTGGAATAATTTTAGGATTCCTTTCAGGACTTGGAGAAAAGAAATT
TGTTAATACCTTTATAGCTGGTGCTGCTGATTTAGTAGGAGTTGCCTTAGTTATAGGTGTTGCAAGATCTATAAACTTAA
TACTTGAAAATGGTAAAATATCAGATACTTTACTTTATGTATCCTCAAATGGAATTCAAGGTATGGATAAAAATATATTT
ATAATATTAATGCTTGTTATATTCATAATCTTAGGATTCTTTATTCCATCTTCATCTGGTCTTGCTGTTTTATCAATTCC
AATAATGGCACCACTTGCAGATACAGTTGGTTTACCAAGGGATGTTATAGTTAGTGCTTACCAATTTGGTCAAGGATTAA
TCTCCTTTATAACTCCAACAGGATTAATTTTAGCTACCCTTGCTATGGTTGATGTAACCTATAATAAATGGCTGAAATTT
ATTATGCCTTTAATGGGAATTATAGCAGCCTTTGCAGCCTTACTATTATTAGTACAGGTACACTTTTAA

Upstream 100 bases:

>100_bases
ATAATTAATATAATACAAGTATTTAATTAATAAAATTTATTTATTAATATTATTAATTGTAAACTTTAACAATACAAAAA
ACTTAAGAGGAGGTAAAAAA

Downstream 100 bases:

>100_bases
AACATTTAAAATATTAGTGTATTAAAATCACTTTTTTATAAAACTTACAAACAATATGAAAATTATATAGATAAGCTTTG
GAATTTAAATTCTTAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MSKKKKISFPTAFTVLFIVLILSAILTYVIPAGSYSKLSYNEAENTFIVTNPQGESTKEAATQNTLDKLGIKIDLSKFTD
GSINKPIAIPNTYEKVAQNPQGIAQIIEAPIQGTYDTIDIIMFVLIIGGVIGVLNTTGAFNAGIASLSKITKGKEYILII
LLSILISLGGTTFGLAEETIALYPILLPIFLASGYDAIVCIATIYMGSSIGTMFSTVNPFSSVIASTAAGISFKEGLDFR
MIGLVLATLITIIYILRYAKKVKNDPSKSLVYDQKDEIDSKFLHESSNDVPVFTWRLKLMLLIFAGSFIILVYGVSAKGW
GFIQMTALFLVVGIILGFLSGLGEKKFVNTFIAGAADLVGVALVIGVARSINLILENGKISDTLLYVSSNGIQGMDKNIF
IILMLVIFIILGFFIPSSSGLAVLSIPIMAPLADTVGLPRDVIVSAYQFGQGLISFITPTGLILATLAMVDVTYNKWLKF
IMPLMGIIAAFAALLLLVQVHF

Sequences:

>Translated_502_residues
MSKKKKISFPTAFTVLFIVLILSAILTYVIPAGSYSKLSYNEAENTFIVTNPQGESTKEAATQNTLDKLGIKIDLSKFTD
GSINKPIAIPNTYEKVAQNPQGIAQIIEAPIQGTYDTIDIIMFVLIIGGVIGVLNTTGAFNAGIASLSKITKGKEYILII
LLSILISLGGTTFGLAEETIALYPILLPIFLASGYDAIVCIATIYMGSSIGTMFSTVNPFSSVIASTAAGISFKEGLDFR
MIGLVLATLITIIYILRYAKKVKNDPSKSLVYDQKDEIDSKFLHESSNDVPVFTWRLKLMLLIFAGSFIILVYGVSAKGW
GFIQMTALFLVVGIILGFLSGLGEKKFVNTFIAGAADLVGVALVIGVARSINLILENGKISDTLLYVSSNGIQGMDKNIF
IILMLVIFIILGFFIPSSSGLAVLSIPIMAPLADTVGLPRDVIVSAYQFGQGLISFITPTGLILATLAMVDVTYNKWLKF
IMPLMGIIAAFAALLLLVQVHF
>Mature_501_residues
SKKKKISFPTAFTVLFIVLILSAILTYVIPAGSYSKLSYNEAENTFIVTNPQGESTKEAATQNTLDKLGIKIDLSKFTDG
SINKPIAIPNTYEKVAQNPQGIAQIIEAPIQGTYDTIDIIMFVLIIGGVIGVLNTTGAFNAGIASLSKITKGKEYILIIL
LSILISLGGTTFGLAEETIALYPILLPIFLASGYDAIVCIATIYMGSSIGTMFSTVNPFSSVIASTAAGISFKEGLDFRM
IGLVLATLITIIYILRYAKKVKNDPSKSLVYDQKDEIDSKFLHESSNDVPVFTWRLKLMLLIFAGSFIILVYGVSAKGWG
FIQMTALFLVVGIILGFLSGLGEKKFVNTFIAGAADLVGVALVIGVARSINLILENGKISDTLLYVSSNGIQGMDKNIFI
ILMLVIFIILGFFIPSSSGLAVLSIPIMAPLADTVGLPRDVIVSAYQFGQGLISFITPTGLILATLAMVDVTYNKWLKFI
MPLMGIIAAFAALLLLVQVHF

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=506, Percent_Identity=30.2371541501976, Blast_Score=224, Evalue=7e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 54000; Mature: 53869

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKKISFPTAFTVLFIVLILSAILTYVIPAGSYSKLSYNEAENTFIVTNPQGESTKEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHH
ATQNTLDKLGIKIDLSKFTDGSINKPIAIPNTYEKVAQNPQGIAQIIEAPIQGTYDTIDI
HHHHHHHHCCCEEEECCCCCCCCCCCEECCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHH
IMFVLIIGGVIGVLNTTGAFNAGIASLSKITKGKEYILIILLSILISLGGTTFGLAEETI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
ALYPILLPIFLASGYDAIVCIATIYMGSSIGTMFSTVNPFSSVIASTAAGISFKEGLDFR
HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHH
MIGLVLATLITIIYILRYAKKVKNDPSKSLVYDQKDEIDSKFLHESSNDVPVFTWRLKLM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
LLIFAGSFIILVYGVSAKGWGFIQMTALFLVVGIILGFLSGLGEKKFVNTFIAGAADLVG
HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VALVIGVARSINLILENGKISDTLLYVSSNGIQGMDKNIFIILMLVIFIILGFFIPSSSG
HHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
LAVLSIPIMAPLADTVGLPRDVIVSAYQFGQGLISFITPTGLILATLAMVDVTYNKWLKF
CEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
IMPLMGIIAAFAALLLLVQVHF
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKKKKISFPTAFTVLFIVLILSAILTYVIPAGSYSKLSYNEAENTFIVTNPQGESTKEA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHH
ATQNTLDKLGIKIDLSKFTDGSINKPIAIPNTYEKVAQNPQGIAQIIEAPIQGTYDTIDI
HHHHHHHHCCCEEEECCCCCCCCCCCEECCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHH
IMFVLIIGGVIGVLNTTGAFNAGIASLSKITKGKEYILIILLSILISLGGTTFGLAEETI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
ALYPILLPIFLASGYDAIVCIATIYMGSSIGTMFSTVNPFSSVIASTAAGISFKEGLDFR
HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHH
MIGLVLATLITIIYILRYAKKVKNDPSKSLVYDQKDEIDSKFLHESSNDVPVFTWRLKLM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
LLIFAGSFIILVYGVSAKGWGFIQMTALFLVVGIILGFLSGLGEKKFVNTFIAGAADLVG
HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VALVIGVARSINLILENGKISDTLLYVSSNGIQGMDKNIFIILMLVIFIILGFFIPSSSG
HHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
LAVLSIPIMAPLADTVGLPRDVIVSAYQFGQGLISFITPTGLILATLAMVDVTYNKWLKF
CEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
IMPLMGIIAAFAALLLLVQVHF
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]