| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is hisB [H]
Identifier: 18309954
GI number: 18309954
Start: 1171854
End: 1172639
Strand: Direct
Name: hisB [H]
Synonym: CPE0972
Alternate gene names: 18309954
Gene position: 1171854-1172639 (Clockwise)
Preceding gene: 18309951
Following gene: 18309957
Centisome position: 38.66
GC content: 29.52
Gene sequence:
>786_bases ATGAGAAGCAATTATCATACACATACATATAGATGTAATCATGCCACAGGAACTATTGAAGATTATGTTAAAGAAGCTAT AAAAGCTAATATAGATGAAATTGGAATTTCTGATCACTTACCACATCCAGGTAAGAATATAGATAATTATCACAGAATGG CTTATGAAGATTTAGAGGATTACTTTGGAAAGATAGAAGAAGCTATAGAAAAGTATGGAGATAAAATATCAATAAAAAGA TCCATAGAATGCGAGTATTTCCCAGACTTCGGATGGCTTTATGAAGAGCTAAAGGATAAATATAAGGCAGATTATTTAGC TTTAGGAGTACATTTCTTCCCTTATAAAGGAGAATGGGTATATGTTGGAACAATAGAATTAACGCCAGAAATCCTAATGA TTTATGCTGATTTTGTAGTGGAAGCAATTAAGAGTGGATATTTTTCATATTTAGCACATCCAGATTTATTTGGAATGACA TATAAAAATTGGGATGAACGTGCAGAAGAGGCCTCAAAGAGAATTTTAAAAGCTGCTGAAGAAATGAATATGCCTATAGA GATAAATGTAAATGGAATGAGAAAAAATAAAATTTCTTATAATAATGGAGAAAGATATCAATATCCAATAAAAGAGTTTT GGGAATTATCTAAGGAATATAATGTTAAAAGAATAGTTGGAATTGATGCTCATAATCCAGAAGAAATGCATGATTTAGAT ATGGGGTTAAACTTTGCTAAAGAACATGATTTAACTATTATAGATAGATTAGAAGTTAATAAATAA
Upstream 100 bases:
>100_bases AAGAGATAATAGATTTATAGAATGGAAATCTAATGTTGGTCAAATTTTTATAATTAGATACAATAGTAAATGAATGTTTA AATACATAGGAGGAGTTTTA
Downstream 100 bases:
>100_bases AAAATAGGAGCTTAGTTAAGCTCCTATTTTTTATTTATATGTTGTTTTACTTGATGGCTCATTGGATTCATATGGAGTAT TTTCATTAGCTTTATTTTTA
Product: histidinol phosphatase
Products: NA
Alternate protein names: HolPase [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MRSNYHTHTYRCNHATGTIEDYVKEAIKANIDEIGISDHLPHPGKNIDNYHRMAYEDLEDYFGKIEEAIEKYGDKISIKR SIECEYFPDFGWLYEELKDKYKADYLALGVHFFPYKGEWVYVGTIELTPEILMIYADFVVEAIKSGYFSYLAHPDLFGMT YKNWDERAEEASKRILKAAEEMNMPIEINVNGMRKNKISYNNGERYQYPIKEFWELSKEYNVKRIVGIDAHNPEEMHDLD MGLNFAKEHDLTIIDRLEVNK
Sequences:
>Translated_261_residues MRSNYHTHTYRCNHATGTIEDYVKEAIKANIDEIGISDHLPHPGKNIDNYHRMAYEDLEDYFGKIEEAIEKYGDKISIKR SIECEYFPDFGWLYEELKDKYKADYLALGVHFFPYKGEWVYVGTIELTPEILMIYADFVVEAIKSGYFSYLAHPDLFGMT YKNWDERAEEASKRILKAAEEMNMPIEINVNGMRKNKISYNNGERYQYPIKEFWELSKEYNVKRIVGIDAHNPEEMHDLD MGLNFAKEHDLTIIDRLEVNK >Mature_261_residues MRSNYHTHTYRCNHATGTIEDYVKEAIKANIDEIGISDHLPHPGKNIDNYHRMAYEDLEDYFGKIEEAIEKYGDKISIKR SIECEYFPDFGWLYEELKDKYKADYLALGVHFFPYKGEWVYVGTIELTPEILMIYADFVVEAIKSGYFSYLAHPDLFGMT YKNWDERAEEASKRILKAAEEMNMPIEINVNGMRKNKISYNNGERYQYPIKEFWELSKEYNVKRIVGIDAHNPEEMHDLD MGLNFAKEHDLTIIDRLEVNK
Specific function: Unknown
COG id: COG1387
COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHP hydrolase family. HisK subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010140 - InterPro: IPR004013 - InterPro: IPR016195 [H]
Pfam domain/function: PF02811 PHP [H]
EC number: =3.1.3.15 [H]
Molecular weight: Translated: 30815; Mature: 30815
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSNYHTHTYRCNHATGTIEDYVKEAIKANIDEIGISDHLPHPGKNIDNYHRMAYEDLED CCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH YFGKIEEAIEKYGDKISIKRSIECEYFPDFGWLYEELKDKYKADYLALGVHFFPYKGEWV HHHHHHHHHHHCCCEEEEEEEECEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCEE YVGTIELTPEILMIYADFVVEAIKSGYFSYLAHPDLFGMTYKNWDERAEEASKRILKAAE EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH EMNMPIEINVNGMRKNKISYNNGERYQYPIKEFWELSKEYNVKRIVGIDAHNPEEMHDLD HCCCCEEEEECCEECCCCCCCCCCEEECCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH MGLNFAKEHDLTIIDRLEVNK HCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MRSNYHTHTYRCNHATGTIEDYVKEAIKANIDEIGISDHLPHPGKNIDNYHRMAYEDLED CCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH YFGKIEEAIEKYGDKISIKRSIECEYFPDFGWLYEELKDKYKADYLALGVHFFPYKGEWV HHHHHHHHHHHCCCEEEEEEEECEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCEE YVGTIELTPEILMIYADFVVEAIKSGYFSYLAHPDLFGMTYKNWDERAEEASKRILKAAE EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH EMNMPIEINVNGMRKNKISYNNGERYQYPIKEFWELSKEYNVKRIVGIDAHNPEEMHDLD HCCCCEEEEECCEECCCCCCCCCCEEECCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH MGLNFAKEHDLTIIDRLEVNK HCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]