| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is gntP [C]
Identifier: 18309842
GI number: 18309842
Start: 1053981
End: 1055240
Strand: Direct
Name: gntP [C]
Synonym: CPE0860
Alternate gene names: 18309842
Gene position: 1053981-1055240 (Clockwise)
Preceding gene: 18309841
Following gene: 18309843
Centisome position: 34.77
GC content: 36.9
Gene sequence:
>1260_bases GTGAATGTAACAGTTACAGCTTTAGGTGCAGTAATTGCATTAGTTATTGCAATCACTCTTATCATAAAAAAGGTTCATCC AGCATACGGACTTATATTAGGAGCTTTAATAGGTGGACTTGTTGGTGGAGCAGGACTAACAGGGACAGTTAATTTAATGA TGGATGGAGCCAAAAATATGATGCCTGCTATCCTTAGAATACTTACAGCAGGGGTACTAGCTGGGGTTTTAATTGAATCC GGAGCGGCAGCCAAGATTGCAGAGACAATAGTTGAGAAGATTGGAGAATCAAGAGCTCTTATAGCCTTAGCAATAGCTAC TATGGTTTTAACAATGGTTGGAGTTTTTGTAGACGTTTCAGTAATAACAGTATCTCCAATAGCTTTAGCAATAGCTCACA AATCAGGTTTAAGTAAACCAGCTATATTATTAGCCATGGTTGGTGGAGGTAAGGCAGGAAATATAATGTCTCCAAACCCA AATACCATTGCGGCAGCAGATAATTTAGGAGTTTCATTAACTAATGTTATGATAGCAGGTATAGTACCAGCTATATTTGG AGTTATAATTACATGTATATTAGCAAGTAGAATAAAACAAAAAGGTTCTTTAGTAGAATCTGATGAACATATGAAAGAGT TAACAGATATGCCTGGATTTTTACCAGCAATGGTTGGACCATTAGTAGCAATAATCTTATTAATGTTAAGACCAATAGCA GGCATTGCTATAGATCCATTAATAGCTTTACCGGTAGGTGGTATATGCGGAATACTAGCTATGGGAAAAATTAAGCATAT TAACAAATATGCAACATATGGACTAGCTAAGATGAGTGGAGTAGCTATACTTTTAATAGGTACAGGTACTTTAGCGGGAA TAATTGCTAACTCAGGATTAAAGGATGTTATTATAAGTGGAATAAACGCTTTAGGATTGCCAAGCTTTATGTTAGCACCG GTTTCAGGAATACTTATGTCAGCGGCAACTGCCTCTACTACTTCAGGAACAGCGGTGGCTACATCAGTATTTGGACCAAC AATTGTTCAATTAGGAGTGGCACCACTTGCTACAGCAGCTATGATACATGCTGGGGCTACAGTTTTAGATCACTTACCTC ATGGAAGCTTCTTCCACGCTACTGGTGGAAGTGTTTCAATGGACATGAAGGAAAGACTTAAACTTATACCATATGAATCT TTAGTTGGATTAACAATGACAATTGTATCAACTATAATATTTGGAATAATATTAAAATAG
Upstream 100 bases:
>100_bases TAGTGATATTAAATAATGATTTTGAATATGAAAACTTATACAATGAAAATCGTCAATATAAATAAGAATAAATGAGTTTA ATAAGAAGGAGGAATTTATT
Downstream 100 bases:
>100_bases TTATTTAATAAATAAAGAAAAGTGTTAACTATATGATTATTATCGCTAAGGTATAAATATTTTGTTACTTTATAATAAAG AAAATTTTTAATAAGGTTTA
Product: gluconate permease
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNVTVTALGAVIALVIAITLIIKKVHPAYGLILGALIGGLVGGAGLTGTVNLMMDGAKNMMPAILRILTAGVLAGVLIES GAAAKIAETIVEKIGESRALIALAIATMVLTMVGVFVDVSVITVSPIALAIAHKSGLSKPAILLAMVGGGKAGNIMSPNP NTIAAADNLGVSLTNVMIAGIVPAIFGVIITCILASRIKQKGSLVESDEHMKELTDMPGFLPAMVGPLVAIILLMLRPIA GIAIDPLIALPVGGICGILAMGKIKHINKYATYGLAKMSGVAILLIGTGTLAGIIANSGLKDVIISGINALGLPSFMLAP VSGILMSAATASTTSGTAVATSVFGPTIVQLGVAPLATAAMIHAGATVLDHLPHGSFFHATGGSVSMDMKERLKLIPYES LVGLTMTIVSTIIFGIILK
Sequences:
>Translated_419_residues MNVTVTALGAVIALVIAITLIIKKVHPAYGLILGALIGGLVGGAGLTGTVNLMMDGAKNMMPAILRILTAGVLAGVLIES GAAAKIAETIVEKIGESRALIALAIATMVLTMVGVFVDVSVITVSPIALAIAHKSGLSKPAILLAMVGGGKAGNIMSPNP NTIAAADNLGVSLTNVMIAGIVPAIFGVIITCILASRIKQKGSLVESDEHMKELTDMPGFLPAMVGPLVAIILLMLRPIA GIAIDPLIALPVGGICGILAMGKIKHINKYATYGLAKMSGVAILLIGTGTLAGIIANSGLKDVIISGINALGLPSFMLAP VSGILMSAATASTTSGTAVATSVFGPTIVQLGVAPLATAAMIHAGATVLDHLPHGSFFHATGGSVSMDMKERLKLIPYES LVGLTMTIVSTIIFGIILK >Mature_419_residues MNVTVTALGAVIALVIAITLIIKKVHPAYGLILGALIGGLVGGAGLTGTVNLMMDGAKNMMPAILRILTAGVLAGVLIES GAAAKIAETIVEKIGESRALIALAIATMVLTMVGVFVDVSVITVSPIALAIAHKSGLSKPAILLAMVGGGKAGNIMSPNP NTIAAADNLGVSLTNVMIAGIVPAIFGVIITCILASRIKQKGSLVESDEHMKELTDMPGFLPAMVGPLVAIILLMLRPIA GIAIDPLIALPVGGICGILAMGKIKHINKYATYGLAKMSGVAILLIGTGTLAGIIANSGLKDVIISGINALGLPSFMLAP VSGILMSAATASTTSGTAVATSVFGPTIVQLGVAPLATAAMIHAGATVLDHLPHGSFFHATGGSVSMDMKERLKLIPYES LVGLTMTIVSTIIFGIILK
Specific function: High-Affinity Gluconate Transporter With Fairly Broad Specificity, Including Low Affinity For Glucuronate, Several Disaccharides, And Some Hexoses, But Not Glucose. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 42244; Mature: 42244
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTVTALGAVIALVIAITLIIKKVHPAYGLILGALIGGLVGGAGLTGTVNLMMDGAKNM CCEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEHHEECCHHHH MPAILRILTAGVLAGVLIESGAAAKIAETIVEKIGESRALIALAIATMVLTMVGVFVDVS HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VITVSPIALAIAHKSGLSKPAILLAMVGGGKAGNIMSPNPNTIAAADNLGVSLTNVMIAG HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH IVPAIFGVIITCILASRIKQKGSLVESDEHMKELTDMPGFLPAMVGPLVAIILLMLRPIA HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GIAIDPLIALPVGGICGILAMGKIKHINKYATYGLAKMSGVAILLIGTGTLAGIIANSGL CHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHCCCH KDVIISGINALGLPSFMLAPVSGILMSAATASTTSGTAVATSVFGPTIVQLGVAPLATAA HHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHH MIHAGATVLDHLPHGSFFHATGGSVSMDMKERLKLIPYESLVGLTMTIVSTIIFGIILK HHHHCHHHHHHCCCCCEEECCCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVTVTALGAVIALVIAITLIIKKVHPAYGLILGALIGGLVGGAGLTGTVNLMMDGAKNM CCEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEHHEECCHHHH MPAILRILTAGVLAGVLIESGAAAKIAETIVEKIGESRALIALAIATMVLTMVGVFVDVS HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VITVSPIALAIAHKSGLSKPAILLAMVGGGKAGNIMSPNPNTIAAADNLGVSLTNVMIAG HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH IVPAIFGVIITCILASRIKQKGSLVESDEHMKELTDMPGFLPAMVGPLVAIILLMLRPIA HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GIAIDPLIALPVGGICGILAMGKIKHINKYATYGLAKMSGVAILLIGTGTLAGIIANSGL CHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHCCCH KDVIISGINALGLPSFMLAPVSGILMSAATASTTSGTAVATSVFGPTIVQLGVAPLATAA HHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHH MIHAGATVLDHLPHGSFFHATGGSVSMDMKERLKLIPYESLVGLTMTIVSTIIFGIILK HHHHCHHHHHHCCCCCEEECCCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]