| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is glxK [H]
Identifier: 18309843
GI number: 18309843
Start: 1055464
End: 1056585
Strand: Direct
Name: glxK [H]
Synonym: CPE0861
Alternate gene names: 18309843
Gene position: 1055464-1056585 (Clockwise)
Preceding gene: 18309842
Following gene: 18309844
Centisome position: 34.82
GC content: 35.03
Gene sequence:
>1122_bases ATGAAATTTGTATTAGCACCAGATTCATTCAAGGAAAGTATGACTTCAATGGAAGCCTGTAATGCTATGGAAAGAGGAAT TAAAAAGGTCTTTAAAGATGCAGAATGCATAAAGGTTCCAATGGCTGACGGTGGAGAGGGAACTGTAGAAGCTTTAGTTC ATGCTACCTTTGGAAGAATAGAAAGAGTAAATGTTACTGGACCTTTAGGAAATAAGGTGGAAGCTTTTTATGGAGTTTTA GGTAATGGAAAGACTGCTGTCATAGAAATGGCTAGTGCTTCAGGGATTCAACTTGTTAAGAGAGAAGAAAGAAATCCTTT AATAACAACAACGTTTGGAACTGGAGAACTTATAAAGGCTGCATTAGATCAAGGAATAAAACATTTAGTTATAGGAATAG GTGGAAGTGCCACTAATGATGGAGGATGTGGAATGCTTCAAGCTTTAGGTGGAAGACTTTTAGACAAGGAAGGAAATCAA ATAGCCTTTGGTGGAGGAGCATTAAAAGATATAGAAAGTATTGATTTAAGTTCTTTAGATGAAAGACTAAAGGAAGTATC AATCGAAGTAGCTTGTGATGTAACTAATCCATTAGTAGGAGAAAAAGGAGCCTCAGCAGTATTTGGTCCTCAAAAGGGAG CAACTAAAGAAGTGGTTAAAGAATTAGATAATAATTTAGCTCATTATGCTTCTGTAATAAAAAAAGACCTAGGAAAAGAA GTTTCACACATAGAAGGTTCTGGTGCTGCTGGAGGATTAGGTGCTGCTTTATTACTATTAGGTGGAGAATTAAAAAGAGG TATAGAGCTTGTAATAAAACATACAGAGTTAGCTGAAAAGGTAAAGGGAGCAGACTTTGTATTTACTGGTGAAGGAAGTA TAGATGATCAAACTATATATGGAAAAACACCAATGGGAGTTGCTACTGTGGCTAAGGAAAATGGAGTTTCTACAATTGCC TTTTCAGGAAAAGTTGGAGAGGGAATAGAAGGCCTTTATGAAATAGGTATAAAGAGTATATTTAGTATAATGACTGGAGT TTCAACTTTAGATGAAGCTTTAAAAGAAGGAAGTAGAAATTTAGAATTAACAACTGAAAATGTAGTTAGACTTTTAAAAT AA
Upstream 100 bases:
>100_bases TTAACTTTTAAGAATTATGATTTAAAAAAGAGTTTTTAGTAAAAGCACAGTGGATTTTAAAATGAAAGGTTAAGATAAAA TCTAGTAGGAGGAAATAAAG
Downstream 100 bases:
>100_bases AATTTAATACTTGCTTAAAGATAGATAGTTTAAGGTGAACATAAGCAATAAAAAATATATTGTTTGTGTTCACTTTTTTA TTATAAAGAAAAATCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MKFVLAPDSFKESMTSMEACNAMERGIKKVFKDAECIKVPMADGGEGTVEALVHATFGRIERVNVTGPLGNKVEAFYGVL GNGKTAVIEMASASGIQLVKREERNPLITTTFGTGELIKAALDQGIKHLVIGIGGSATNDGGCGMLQALGGRLLDKEGNQ IAFGGGALKDIESIDLSSLDERLKEVSIEVACDVTNPLVGEKGASAVFGPQKGATKEVVKELDNNLAHYASVIKKDLGKE VSHIEGSGAAGGLGAALLLLGGELKRGIELVIKHTELAEKVKGADFVFTGEGSIDDQTIYGKTPMGVATVAKENGVSTIA FSGKVGEGIEGLYEIGIKSIFSIMTGVSTLDEALKEGSRNLELTTENVVRLLK
Sequences:
>Translated_373_residues MKFVLAPDSFKESMTSMEACNAMERGIKKVFKDAECIKVPMADGGEGTVEALVHATFGRIERVNVTGPLGNKVEAFYGVL GNGKTAVIEMASASGIQLVKREERNPLITTTFGTGELIKAALDQGIKHLVIGIGGSATNDGGCGMLQALGGRLLDKEGNQ IAFGGGALKDIESIDLSSLDERLKEVSIEVACDVTNPLVGEKGASAVFGPQKGATKEVVKELDNNLAHYASVIKKDLGKE VSHIEGSGAAGGLGAALLLLGGELKRGIELVIKHTELAEKVKGADFVFTGEGSIDDQTIYGKTPMGVATVAKENGVSTIA FSGKVGEGIEGLYEIGIKSIFSIMTGVSTLDEALKEGSRNLELTTENVVRLLK >Mature_373_residues MKFVLAPDSFKESMTSMEACNAMERGIKKVFKDAECIKVPMADGGEGTVEALVHATFGRIERVNVTGPLGNKVEAFYGVL GNGKTAVIEMASASGIQLVKREERNPLITTTFGTGELIKAALDQGIKHLVIGIGGSATNDGGCGMLQALGGRLLDKEGNQ IAFGGGALKDIESIDLSSLDERLKEVSIEVACDVTNPLVGEKGASAVFGPQKGATKEVVKELDNNLAHYASVIKKDLGKE VSHIEGSGAAGGLGAALLLLGGELKRGIELVIKHTELAEKVKGADFVFTGEGSIDDQTIYGKTPMGVATVAKENGVSTIA FSGKVGEGIEGLYEIGIKSIFSIMTGVSTLDEALKEGSRNLELTTENVVRLLK
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=373, Percent_Identity=51.2064343163539, Blast_Score=372, Evalue=1e-104, Organism=Escherichia coli, GI1786724, Length=374, Percent_Identity=50.8021390374332, Blast_Score=360, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 38998; Mature: 38998
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVLAPDSFKESMTSMEACNAMERGIKKVFKDAECIKVPMADGGEGTVEALVHATFGRI CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCE ERVNVTGPLGNKVEAFYGVLGNGKTAVIEMASASGIQLVKREERNPLITTTFGTGELIKA EEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCHHHHHH ALDQGIKHLVIGIGGSATNDGGCGMLQALGGRLLDKEGNQIAFGGGALKDIESIDLSSLD HHHCCCCEEEEECCCCCCCCCCCHHHHHHCCHHCCCCCCEEEECCCCHHHHHHCCHHHHH ERLKEVSIEVACDVTNPLVGEKGASAVFGPQKGATKEVVKELDNNLAHYASVIKKDLGKE HHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VSHIEGSGAAGGLGAALLLLGGELKRGIELVIKHTELAEKVKGADFVFTGEGSIDDQTIY HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE GKTPMGVATVAKENGVSTIAFSGKVGEGIEGLYEIGIKSIFSIMTGVSTLDEALKEGSRN CCCCCCCEEEHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LELTTENVVRLLK EEEEHHHHHHHHC >Mature Secondary Structure MKFVLAPDSFKESMTSMEACNAMERGIKKVFKDAECIKVPMADGGEGTVEALVHATFGRI CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCE ERVNVTGPLGNKVEAFYGVLGNGKTAVIEMASASGIQLVKREERNPLITTTFGTGELIKA EEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCHHHHHH ALDQGIKHLVIGIGGSATNDGGCGMLQALGGRLLDKEGNQIAFGGGALKDIESIDLSSLD HHHCCCCEEEEECCCCCCCCCCCHHHHHHCCHHCCCCCCEEEECCCCHHHHHHCCHHHHH ERLKEVSIEVACDVTNPLVGEKGASAVFGPQKGATKEVVKELDNNLAHYASVIKKDLGKE HHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VSHIEGSGAAGGLGAALLLLGGELKRGIELVIKHTELAEKVKGADFVFTGEGSIDDQTIY HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE GKTPMGVATVAKENGVSTIAFSGKVGEGIEGLYEIGIKSIFSIMTGVSTLDEALKEGSRN CCCCCCCEEEHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LELTTENVVRLLK EEEEHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]