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The map label for this gene is ysfB [H]

Identifier: 18309841

GI number: 18309841

Start: 1052896

End: 1053834

Strand: Direct

Name: ysfB [H]

Synonym: CPE0859

Alternate gene names: 18309841

Gene position: 1052896-1053834 (Clockwise)

Preceding gene: 18309840

Following gene: 18309842

Centisome position: 34.73

GC content: 26.62

Gene sequence:

>939_bases
ATGATACATAATGGGGCTTTAGAAGCCTTAAGGGTAAAAAAGGTGGTTGAAATATCTAAGGATGGGGATAAGGTGAAATC
TGGAGTTAATTCACCTATATTTTTTAGGGAAAAAGCTATAGGGGTTATTGGTATAACAGGGAATCCTAAAAATGTTAGGC
AATTTACACAGCTTGTAACTGTTACTGCTGAACTTTTAATAAATCAAGAATACACTTTGAATAAACATATAGTTAAAGAA
AGATTAAAAGAAGAGTTTATTTATGAATGGCTTTATTCAAAAGAGGCCTATGACTTAGAATTTATTCAAAGGGGAGCCAA
TGTAGGTATTGATATTTCCTTAGATAGAATAATACTTGTATTGGAGTTTCAGAAAGATCAATTTAAGGAAATAATTAAAA
AAATAAAAAGGTTCATAAAAGAAGATGAGTACTATATAAATTTAACTTCAAATAGAATAGTTGTAATTTTGTTAGATAAT
AATTTGCTCTTTAAGAGGTTGAAAGAATTAAAGGAAATTATGAGTGACACAAATTCTAAGATAGGATTAAGCTCAAAACA
TAAAATTATATCAAAATCTATGAATGAGGCAGTGGAAGCAGTAGATATAGGAAATAAATTATATAAAAATGAGTTCTTTT
ATGATTATAAAAAAGTAAAGGTTTTTAGTTACTTAGATAATTTTTTAGATGAAGAGGAATGGAAAATTATTAAAAACAAG
ATATTAGAGGAAAATATGGGAGAAGAATTATTAGAAACCTTTATATCTTATATGAAGAATAGTGGAGAGAGAAAAAAGAC
CGCAGAATCCTTACATATACATAGAAATACATTGAATTATAGACTAGAGAGAATTGAGGAAATAACAGGCTTAAGCTTTG
ATAATTATTTAGATTTATTTCAATTTTTGATTGCATATATAGTAAGTCAATTAAAATAA

Upstream 100 bases:

>100_bases
AAATATAGTTAATAAAATGATGGAGGTTATTCCTTACAATGTAAACATAATGAATCATAAGGGAGTAATAATAGGTAGTG
GTGATTCGAGTAGAATAGGA

Downstream 100 bases:

>100_bases
AAAAAGGTTTTCTTTGTGCGTTTGCATAAAGAAAACCTTTTTATTTTAGTGATATTAAATAATGATTTTGAATATGAAAA
CTTATACAATGAAAATCGTC

Product: putative carbohydrate diacid regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MIHNGALEALRVKKVVEISKDGDKVKSGVNSPIFFREKAIGVIGITGNPKNVRQFTQLVTVTAELLINQEYTLNKHIVKE
RLKEEFIYEWLYSKEAYDLEFIQRGANVGIDISLDRIILVLEFQKDQFKEIIKKIKRFIKEDEYYINLTSNRIVVILLDN
NLLFKRLKELKEIMSDTNSKIGLSSKHKIISKSMNEAVEAVDIGNKLYKNEFFYDYKKVKVFSYLDNFLDEEEWKIIKNK
ILEENMGEELLETFISYMKNSGERKKTAESLHIHRNTLNYRLERIEEITGLSFDNYLDLFQFLIAYIVSQLK

Sequences:

>Translated_312_residues
MIHNGALEALRVKKVVEISKDGDKVKSGVNSPIFFREKAIGVIGITGNPKNVRQFTQLVTVTAELLINQEYTLNKHIVKE
RLKEEFIYEWLYSKEAYDLEFIQRGANVGIDISLDRIILVLEFQKDQFKEIIKKIKRFIKEDEYYINLTSNRIVVILLDN
NLLFKRLKELKEIMSDTNSKIGLSSKHKIISKSMNEAVEAVDIGNKLYKNEFFYDYKKVKVFSYLDNFLDEEEWKIIKNK
ILEENMGEELLETFISYMKNSGERKKTAESLHIHRNTLNYRLERIEEITGLSFDNYLDLFQFLIAYIVSQLK
>Mature_312_residues
MIHNGALEALRVKKVVEISKDGDKVKSGVNSPIFFREKAIGVIGITGNPKNVRQFTQLVTVTAELLINQEYTLNKHIVKE
RLKEEFIYEWLYSKEAYDLEFIQRGANVGIDISLDRIILVLEFQKDQFKEIIKKIKRFIKEDEYYINLTSNRIVVILLDN
NLLFKRLKELKEIMSDTNSKIGLSSKHKIISKSMNEAVEAVDIGNKLYKNEFFYDYKKVKVFSYLDNFLDEEEWKIIKNK
ILEENMGEELLETFISYMKNSGERKKTAESLHIHRNTLNYRLERIEEITGLSFDNYLDLFQFLIAYIVSQLK

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=349, Percent_Identity=25.5014326647564, Blast_Score=101, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 36704; Mature: 36704

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHNGALEALRVKKVVEISKDGDKVKSGVNSPIFFREKAIGVIGITGNPKNVRQFTQLVT
CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHH
VTAELLINQEYTLNKHIVKERLKEEFIYEWLYSKEAYDLEFIQRGANVGIDISLDRIILV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCEEEEE
LEFQKDQFKEIIKKIKRFIKEDEYYINLTSNRIVVILLDNNLLFKRLKELKEIMSDTNSK
EECCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCCCC
IGLSSKHKIISKSMNEAVEAVDIGNKLYKNEFFYDYKKVKVFSYLDNFLDEEEWKIIKNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ILEENMGEELLETFISYMKNSGERKKTAESLHIHRNTLNYRLERIEEITGLSFDNYLDLF
HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
QFLIAYIVSQLK
HHHHHHHHHHCC
>Mature Secondary Structure
MIHNGALEALRVKKVVEISKDGDKVKSGVNSPIFFREKAIGVIGITGNPKNVRQFTQLVT
CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHH
VTAELLINQEYTLNKHIVKERLKEEFIYEWLYSKEAYDLEFIQRGANVGIDISLDRIILV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCEEEEE
LEFQKDQFKEIIKKIKRFIKEDEYYINLTSNRIVVILLDNNLLFKRLKELKEIMSDTNSK
EECCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCCCC
IGLSSKHKIISKSMNEAVEAVDIGNKLYKNEFFYDYKKVKVFSYLDNFLDEEEWKIIKNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ILEENMGEELLETFISYMKNSGERKKTAESLHIHRNTLNYRLERIEEITGLSFDNYLDLF
HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
QFLIAYIVSQLK
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]