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The map label for this gene is yurM [H]

Identifier: 18309560

GI number: 18309560

Start: 719139

End: 719882

Strand: Direct

Name: yurM [H]

Synonym: CPE0578

Alternate gene names: 18309560

Gene position: 719139-719882 (Clockwise)

Preceding gene: 18309559

Following gene: 18309561

Centisome position: 23.72

GC content: 31.05

Gene sequence:

>744_bases
ATGTCTTCTTTTAAAACTACTAAAGAATTCTATGCAAGTCCATGGGCCTTACCAAAAAGTTTTGGGTTTGCTAACTATAT
GACTGCATTTACAGAAGCTAACATGGGAGCTTACTTCTTCAACTCAATATTAGTTACTATAATAGCTATGGTTTTATCCC
TATGTTTAAGTGTACCAGCATCTTATGTTTTAGCTAGACAAAAGTTCTTTGGATGTAGTTTTATAAAGAATCTATTTATG
GCAGGATTATTTATTCAACCAGTATATATTATAGTACCTTTATTTACAATATTAGAAAAAATGAAACTGTTAAATAATTT
ATTTGCATTAGCTCTTGTATATGCAGTGCTAAGCTTACCTTTCTCAATCTATATAATGAGTGGATTTATGAAGGGGATTG
CAAAGGATTATGAAGAGGCAGCAATGATAGATGGATGTACTAATCTTCAAATATTAACAAAGATAGTAGTTCCATTAGCT
AAACCAGGTATTATAACTATAATGATATTCAACTTTATGAATTATTGGAATGAATATGCTATGGCAATGACTTTCATAAC
AGATGCAGATAAAAAGACATTACCAGTAGGGTTACAAAACTTAATGGAAGTTCAAAAGTTTGCAACTGACTGGGGAGCAT
TATTTGCAGGATTAGTTATAGTAATGGTACCTACAATGGTTATATACTCACTAGTTCATAAGAAGTTAACAGAAGGTGTT
AATATTGGTGGAGTTAAGGGCTAA

Upstream 100 bases:

>100_bases
TACTGAGAACAAAACTAAAAAAGTAATATCTAATACATTATTAAGGATTATATTAATAGCTGCAACTATTTTAGTTATAG
TGCCAATTATATGGACAATA

Downstream 100 bases:

>100_bases
ATTTATTAGCATTTAAAAAAGAAAATAAGATTATTAAAATAAGAGCAGATGTCACTTTTAGTGAGGTCTGCTTTTTTAGT
TAAAATAAAATTAAAATTTA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSSFKTTKEFYASPWALPKSFGFANYMTAFTEANMGAYFFNSILVTIIAMVLSLCLSVPASYVLARQKFFGCSFIKNLFM
AGLFIQPVYIIVPLFTILEKMKLLNNLFALALVYAVLSLPFSIYIMSGFMKGIAKDYEEAAMIDGCTNLQILTKIVVPLA
KPGIITIMIFNFMNYWNEYAMAMTFITDADKKTLPVGLQNLMEVQKFATDWGALFAGLVIVMVPTMVIYSLVHKKLTEGV
NIGGVKG

Sequences:

>Translated_247_residues
MSSFKTTKEFYASPWALPKSFGFANYMTAFTEANMGAYFFNSILVTIIAMVLSLCLSVPASYVLARQKFFGCSFIKNLFM
AGLFIQPVYIIVPLFTILEKMKLLNNLFALALVYAVLSLPFSIYIMSGFMKGIAKDYEEAAMIDGCTNLQILTKIVVPLA
KPGIITIMIFNFMNYWNEYAMAMTFITDADKKTLPVGLQNLMEVQKFATDWGALFAGLVIVMVPTMVIYSLVHKKLTEGV
NIGGVKG
>Mature_246_residues
SSFKTTKEFYASPWALPKSFGFANYMTAFTEANMGAYFFNSILVTIIAMVLSLCLSVPASYVLARQKFFGCSFIKNLFMA
GLFIQPVYIIVPLFTILEKMKLLNNLFALALVYAVLSLPFSIYIMSGFMKGIAKDYEEAAMIDGCTNLQILTKIVVPLAK
PGIITIMIFNFMNYWNEYAMAMTFITDADKKTLPVGLQNLMEVQKFATDWGALFAGLVIVMVPTMVIYSLVHKKLTEGVN
IGGVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=250, Percent_Identity=31.6, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1790464, Length=216, Percent_Identity=25.9259259259259, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1789860, Length=175, Percent_Identity=24.5714285714286, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27500; Mature: 27369

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure 
SSFKTTKEFYASPWALPKSFGFANYMTAFTEANMGAYFFNSILVTIIAMVLSLCLSVPA
CCCHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SYVLARQKFFGCSFIKNLFMAGLFIQPVYIIVPLFTILEKMKLLNNLFALALVYAVLSLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSIYIMSGFMKGIAKDYEEAAMIDGCTNLQILTKIVVPLAKPGIITIMIFNFMNYWNEYA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MAMTFITDADKKTLPVGLQNLMEVQKFATDWGALFAGLVIVMVPTMVIYSLVHKKLTEGV
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NIGGVKG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]