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The map label for this gene is yurN [H]

Identifier: 18309559

GI number: 18309559

Start: 718072

End: 719007

Strand: Direct

Name: yurN [H]

Synonym: CPE0577

Alternate gene names: 18309559

Gene position: 718072-719007 (Clockwise)

Preceding gene: 18309558

Following gene: 18309560

Centisome position: 23.69

GC content: 31.62

Gene sequence:

>936_bases
ATGAACAGTAATAAAAGAAAAATATTTTTAGCAATGTGTGTGTTGCCTGCACTTATACTATTTACAATATTTATGTTATA
CCCAATTGGAAAAGGTTTCATGATGTCTTTATATGAATGGAGTGGGATTTCAGGAGAACCAGTATTTGTGGGGTTAGATA
ACTTTAAAGCACTTTTAAATGATAGATATTTTAAGGAAGCATTTGGGAATACATTTTTCATAATAGTTTTATTTCCAGCA
ATAACAATAACCCTTTCTTTATTCTTAGCTGTAGTAATAACTCAAAGTAAGTTAAAAGAAAAGAATTTCTACAGAGTTAT
ACTATTTTTCCCAAATATATTATCAATGGTTGTTATAGGGGTTTTATTTACATATGTTTATGACCCATCAATAGGAATTC
TTAAAGCATTTTTTGAAATGATAGGACTAGATAAGTTAGCAGGTCTGGCATGGCTTGGAGATTCTAAGTTAGTCCTATGG
GCATTAGTTATAACTATGGTATGGCAAGCAGTTGGTTATTATATGGTAATTTATATAGCTGGATTAGATGGAATATCACC
TTCTCTTTATGAAGTATGTTATTTAGAAGGAGCATCAGCTTGGCAAAAGTTTAGATATGTAACCTTACCACTTTTATGGG
ATGTAGTTAGAGTAACCTTTGCATTCTTTATTACAGGGGCACTTAACTTAAGCTTTATCTTTGTAACTGTAATGACTAAG
GGTGGACCAAATGGAAAATCAGAGGTTTTATTGACATATATGTATAAACAAGCCTTTACAAATTCTCAATATGGATATGC
TATGGCAGTTGGGGTAACTATATTTGCCTTTGCTATGATCCTTGCATTAATAATCAATAAATTAAGTGACTCTGATGCAA
GGGAAGAAAAGAGAGTAAAAAGATTACCACCAGAAGGGAGTGAGATACATGTTTAG

Upstream 100 bases:

>100_bases
TGCTAAAGAAGTTGTTGAATAATTATTAAGATAAAATAAAATTTATTGAGAAGGAGAGGAGGTTCTTCTCCTTCTTTAAA
ATTATAGGGGGTGAAATTTC

Downstream 100 bases:

>100_bases
AAACTAAAAAGAGAAAAAATGTAGGTTTAGATACTGAGAACAAAACTAAAAAAGTAATATCTAATACATTATTAAGGATT
ATATTAATAGCTGCAACTAT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNSNKRKIFLAMCVLPALILFTIFMLYPIGKGFMMSLYEWSGISGEPVFVGLDNFKALLNDRYFKEAFGNTFFIIVLFPA
ITITLSLFLAVVITQSKLKEKNFYRVILFFPNILSMVVIGVLFTYVYDPSIGILKAFFEMIGLDKLAGLAWLGDSKLVLW
ALVITMVWQAVGYYMVIYIAGLDGISPSLYEVCYLEGASAWQKFRYVTLPLLWDVVRVTFAFFITGALNLSFIFVTVMTK
GGPNGKSEVLLTYMYKQAFTNSQYGYAMAVGVTIFAFAMILALIINKLSDSDAREEKRVKRLPPEGSEIHV

Sequences:

>Translated_311_residues
MNSNKRKIFLAMCVLPALILFTIFMLYPIGKGFMMSLYEWSGISGEPVFVGLDNFKALLNDRYFKEAFGNTFFIIVLFPA
ITITLSLFLAVVITQSKLKEKNFYRVILFFPNILSMVVIGVLFTYVYDPSIGILKAFFEMIGLDKLAGLAWLGDSKLVLW
ALVITMVWQAVGYYMVIYIAGLDGISPSLYEVCYLEGASAWQKFRYVTLPLLWDVVRVTFAFFITGALNLSFIFVTVMTK
GGPNGKSEVLLTYMYKQAFTNSQYGYAMAVGVTIFAFAMILALIINKLSDSDAREEKRVKRLPPEGSEIHV
>Mature_311_residues
MNSNKRKIFLAMCVLPALILFTIFMLYPIGKGFMMSLYEWSGISGEPVFVGLDNFKALLNDRYFKEAFGNTFFIIVLFPA
ITITLSLFLAVVITQSKLKEKNFYRVILFFPNILSMVVIGVLFTYVYDPSIGILKAFFEMIGLDKLAGLAWLGDSKLVLW
ALVITMVWQAVGYYMVIYIAGLDGISPSLYEVCYLEGASAWQKFRYVTLPLLWDVVRVTFAFFITGALNLSFIFVTVMTK
GGPNGKSEVLLTYMYKQAFTNSQYGYAMAVGVTIFAFAMILALIINKLSDSDAREEKRVKRLPPEGSEIHV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=305, Percent_Identity=25.2459016393443, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790465, Length=258, Percent_Identity=27.5193798449612, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787570, Length=245, Percent_Identity=26.530612244898, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35093; Mature: 35093

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNKRKIFLAMCVLPALILFTIFMLYPIGKGFMMSLYEWSGISGEPVFVGLDNFKALLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHH
DRYFKEAFGNTFFIIVLFPAITITLSLFLAVVITQSKLKEKNFYRVILFFPNILSMVVIG
HHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHH
VLFTYVYDPSIGILKAFFEMIGLDKLAGLAWLGDSKLVLWALVITMVWQAVGYYMVIYIA
HHHHHHHCCCHHHHHHHHHHHCHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHEE
GLDGISPSLYEVCYLEGASAWQKFRYVTLPLLWDVVRVTFAFFITGALNLSFIFVTVMTK
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC
GGPNGKSEVLLTYMYKQAFTNSQYGYAMAVGVTIFAFAMILALIINKLSDSDAREEKRVK
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RLPPEGSEIHV
CCCCCCCCCCC
>Mature Secondary Structure
MNSNKRKIFLAMCVLPALILFTIFMLYPIGKGFMMSLYEWSGISGEPVFVGLDNFKALLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHH
DRYFKEAFGNTFFIIVLFPAITITLSLFLAVVITQSKLKEKNFYRVILFFPNILSMVVIG
HHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHH
VLFTYVYDPSIGILKAFFEMIGLDKLAGLAWLGDSKLVLWALVITMVWQAVGYYMVIYIA
HHHHHHHCCCHHHHHHHHHHHCHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHEE
GLDGISPSLYEVCYLEGASAWQKFRYVTLPLLWDVVRVTFAFFITGALNLSFIFVTVMTK
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC
GGPNGKSEVLLTYMYKQAFTNSQYGYAMAVGVTIFAFAMILALIINKLSDSDAREEKRVK
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RLPPEGSEIHV
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]