| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is metK
Identifier: 161485642
GI number: 161485642
Start: 2498554
End: 2499729
Strand: Reverse
Name: metK
Synonym: CPE2177
Alternate gene names: 161485642
Gene position: 2499729-2498554 (Counterclockwise)
Preceding gene: 18311160
Following gene: 18311157
Centisome position: 82.46
GC content: 34.95
Gene sequence:
>1176_bases ATGAGAAGATTATTTACATCAGAATCAGTTACTGAAGGGCATCCAGATAAAATATGTGACCAAATTTCAGATGCAGTTTT AGATGCTATATTTGCAAAAGATCCAAACGCAAGAGTTGCTTGTGAAACAGCTGTTACTACAGGATTAGTAATGGTAATGG GAGAAATAACAACTAATTGTTATGTTGATATCCCTAAAATAGCTAGAGAAACTATAAAGAATATAGGATATGATAGAGCT AAATACGGTTTCGACTGTGAAACTTGTTCAGTTATGACTACAATAGACGAGCAATCATCAGATATCGCTATGGGTGTTGA TGAAGCTTTAGAATCAAGAGCTGGAGAAAAAATTGACATAGATGCAGTTGGAGCTGGGGACCAAGGAATGATGTTTGGTT TTGCTACTAATGAAACTGAAGAATTTATGCCAGCACCAATAGCTATGGCTCACAGATTATCAAGAAGATTAACAGAAGTA AGAAAGAACGGAACTTTACCTTACTTAAGACCAGACGGAAAAACACAAGTTACTGTTGAATATGAAAATGACAAACCAGT TAGAATAGATGCAATAGTAATTTCAACACAACATGGTCCAGAAGTATCTCAAGAACAAATACAAGCTGATTTAATGGAAC ATGTTATAAAAGCTGTTATACCAGCAGAGTTATTAGATGAAAATACTAAGTATTATATAAATCCAACAGGAAGATTCGTT ATCGGTGGACCTCAAGGAGATGCTGGATTAACAGGAAGAAAGATCATAGTTGATACTTACGGTGGATATGGAAGACACGG CGGTGGTGCTTTCTCAGGAAAAGACCCAACTAAAGTTGATAGATCAGCTGCATACGCTGCTAGATGGGTAGCTAAAAACT TAGTTGCTGCAGGAATCGCAGATAAATTAGAAGTTCAAGTTGCTTATGCTATAGGAGTTGCTAAGCCAGTATCAATTATA GTAGATACTTTCGGAACTGGAAAAATCTCAGACGAAGAAATAGTTAATATAATAAACAAAGTCTTTGATTTAAGACCAGG AGCTATAATAAGAGATTTAGATTTAAGAAGACCTATATATAGACAAACAGCTGCTTATGGACACTTTGGAAGAACAGATT TAGATCTTCCATGGGAAAACTTAAACAAAGTTGAAGAAATAAAGAAATATCTTTAA
Upstream 100 bases:
>100_bases AGATAAATTAAGTTATTTGTTTAAATAAACAGGGTTGGAATAAATAAAAATGAAAGGGGTGAATTAGCTATCTTATTATG ATAGTAAGATAGCATTAGCC
Downstream 100 bases:
>100_bases TATATAGAAAAGCTTAGGATTTTATATCCTAAGCTTTTTATTATTTTTCTATAAATTTATTATTTTAAGATGAACTATTA ATTTTAAGATTAAGATAAAA
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MRRLFTSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNCYVDIPKIARETIKNIGYDRA KYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDIDAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEV RKNGTLPYLRPDGKTQVTVEYENDKPVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFV IGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSII VDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRRPIYRQTAAYGHFGRTDLDLPWENLNKVEEIKKYL
Sequences:
>Translated_391_residues MRRLFTSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNCYVDIPKIARETIKNIGYDRA KYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDIDAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEV RKNGTLPYLRPDGKTQVTVEYENDKPVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFV IGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSII VDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRRPIYRQTAAYGHFGRTDLDLPWENLNKVEEIKKYL >Mature_391_residues MRRLFTSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNCYVDIPKIARETIKNIGYDRA KYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDIDAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEV RKNGTLPYLRPDGKTQVTVEYENDKPVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFV IGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSII VDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRRPIYRQTAAYGHFGRTDLDLPWENLNKVEEIKKYL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family
Homologues:
Organism=Homo sapiens, GI5174529, Length=386, Percent_Identity=60.1036269430052, Blast_Score=453, Evalue=1e-127, Organism=Homo sapiens, GI4557737, Length=380, Percent_Identity=59.7368421052632, Blast_Score=449, Evalue=1e-126, Organism=Escherichia coli, GI1789311, Length=387, Percent_Identity=61.4987080103359, Blast_Score=496, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17538498, Length=383, Percent_Identity=58.4856396866841, Blast_Score=449, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17538494, Length=383, Percent_Identity=57.9634464751958, Blast_Score=446, Evalue=1e-125, Organism=Caenorhabditis elegans, GI25145633, Length=388, Percent_Identity=57.2164948453608, Blast_Score=442, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17551082, Length=383, Percent_Identity=56.3968668407311, Blast_Score=438, Evalue=1e-123, Organism=Caenorhabditis elegans, GI32565905, Length=383, Percent_Identity=53.0026109660574, Blast_Score=387, Evalue=1e-108, Organism=Caenorhabditis elegans, GI32565911, Length=336, Percent_Identity=56.25, Blast_Score=374, Evalue=1e-104, Organism=Caenorhabditis elegans, GI25145635, Length=341, Percent_Identity=54.8387096774194, Blast_Score=367, Evalue=1e-102, Organism=Caenorhabditis elegans, GI32565903, Length=309, Percent_Identity=56.3106796116505, Blast_Score=341, Evalue=3e-94, Organism=Caenorhabditis elegans, GI32565909, Length=83, Percent_Identity=60.2409638554217, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI32565907, Length=38, Percent_Identity=81.5789473684211, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323209, Length=381, Percent_Identity=60.1049868766404, Blast_Score=459, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6320710, Length=388, Percent_Identity=57.9896907216495, Blast_Score=450, Evalue=1e-127, Organism=Drosophila melanogaster, GI45552159, Length=386, Percent_Identity=56.2176165803109, Blast_Score=410, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580529, Length=386, Percent_Identity=56.2176165803109, Blast_Score=410, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580537, Length=386, Percent_Identity=56.2176165803109, Blast_Score=410, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580533, Length=386, Percent_Identity=56.2176165803109, Blast_Score=410, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580535, Length=386, Percent_Identity=56.2176165803109, Blast_Score=410, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580531, Length=386, Percent_Identity=56.2176165803109, Blast_Score=410, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580527, Length=386, Percent_Identity=55.1813471502591, Blast_Score=403, Evalue=1e-113, Organism=Drosophila melanogaster, GI24580525, Length=386, Percent_Identity=55.1813471502591, Blast_Score=403, Evalue=1e-113, Organism=Drosophila melanogaster, GI24580541, Length=374, Percent_Identity=54.0106951871658, Blast_Score=381, Evalue=1e-106, Organism=Drosophila melanogaster, GI24580539, Length=125, Percent_Identity=52.8, Blast_Score=132, Evalue=4e-31,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METK_CLOP1 (Q0TND4)
Other databases:
- EMBL: CP000246 - RefSeq: YP_696856.1 - ProteinModelPortal: Q0TND4 - SMR: Q0TND4 - STRING: Q0TND4 - GeneID: 4203392 - GenomeReviews: CP000246_GR - KEGG: cpf:CPF_2435 - TIGR: CPF_2435 - eggNOG: COG0192 - HOGENOM: HBG443662 - OMA: IYYAHRL - ProtClustDB: PRK05250 - BioCyc: CPER195103:CPF_2435-MONOMER - GO: GO:0005737 - HAMAP: MF_00086 - InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 - PANTHER: PTHR11964 - PIRSF: PIRSF000497 - TIGRFAMs: TIGR01034
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N; SSF55973 S-AdoMet_synt
EC number: =2.5.1.6
Molecular weight: Translated: 42883; Mature: 42883
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00376 ADOMET_SYNTHASE_1; PS00377 ADOMET_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLFTSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNC CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCE YVDIPKIARETIKNIGYDRAKYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDI EEECHHHHHHHHHHCCCCHHHCCCCCCCCEEEEECCCCCCCCEECHHHHHHHHCCCEEEE DAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVE EEECCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEE YENDKPVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFV ECCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCEEEECCCCCEE IGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIA EECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRRPIY HHHEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHCCHHH RQTAAYGHFGRTDLDLPWENLNKVEEIKKYL HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRRLFTSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNC CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCE YVDIPKIARETIKNIGYDRAKYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDI EEECHHHHHHHHHHCCCCHHHCCCCCCCCEEEEECCCCCCCCEECHHHHHHHHCCCEEEE DAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVE EEECCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEE YENDKPVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFV ECCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCEEEECCCCCEE IGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIA EECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRRPIY HHHEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHCCHHH RQTAAYGHFGRTDLDLPWENLNKVEEIKKYL HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA