Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311160

Identifier: 18311160

GI number: 18311160

Start: 2500946

End: 2501590

Strand: Reverse

Name: 18311160

Synonym: CPE2178

Alternate gene names: NA

Gene position: 2501590-2500946 (Counterclockwise)

Preceding gene: 18311162

Following gene: 161485642

Centisome position: 82.52

GC content: 23.88

Gene sequence:

>645_bases
ATGAATAAAGGGCCTTTAAGTTTTTTAGTACTATTTTTTACTACATTAATAATTGGAACAATGACGTATTTTGTCAACTT
AAATTATGAAGAAGCTAAATTAAAAGCAGAGAGTGTAAAAAGTCAAAAGAATGAAATTTTAAATATTAATGAAGAGGAAA
ATGGACAAAAGGCTATAGAAAACAATAAAGAAGAGTTAAAAGAAGATAGAGAAAAAGAGAATATAAGTGAGAATAACAAT
AAGCAAAGTAATGATTTAGATAAATCTCAATTAAAAGAAGAAAAAGAAATAGAAGGTAAGTCTAAAGAAAATGCTACAAA
TATCAAAAAAAATGAAAAGTCTAAAGAAAAGGTAGCTGAGGAGAAATCATCAAAAGAAAGCAAAGAAGTATTTAAAGTAG
ATAAATATTCAATTCCTAAAAAGATAAATAAAGCAGATAAGTTTAAATTAATGTCTATTGCTAAGAATTTATCTTTAACT
GATTACGGGGTTTTATTAGAGCATATTAAGAGAAATGATGAGTTAGATGCTGCTATTGATATATTTAAAATACTTAAGGA
TAAATTAGAAGAGAAAGAATATAAAGAAATGAAAGATATATTAAGTCCATACATAAATATTGAGTTAATTGAAGAGAAAA
TATAA

Upstream 100 bases:

>100_bases
CACCTCCTCATTAATTATATGAAGGAAGTGTTAGAAATATTAAATGGAAGTATAAAAAAGATTTTAGATGGTAATTATTA
AAATGGAGGTGAATATACTT

Downstream 100 bases:

>100_bases
ATGAAAAAAGAAGTAAAATAAAGAAATTGAGAGGAATTTAAAAATAGATTAACATAATGTTTGAAAATAGCCTAAAATTG
AGTTTGAAATAAAAAGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNKGPLSFLVLFFTTLIIGTMTYFVNLNYEEAKLKAESVKSQKNEILNINEEENGQKAIENNKEELKEDREKENISENNN
KQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAEEKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSLT
DYGVLLEHIKRNDELDAAIDIFKILKDKLEEKEYKEMKDILSPYINIELIEEKI

Sequences:

>Translated_214_residues
MNKGPLSFLVLFFTTLIIGTMTYFVNLNYEEAKLKAESVKSQKNEILNINEEENGQKAIENNKEELKEDREKENISENNN
KQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAEEKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSLT
DYGVLLEHIKRNDELDAAIDIFKILKDKLEEKEYKEMKDILSPYINIELIEEKI
>Mature_214_residues
MNKGPLSFLVLFFTTLIIGTMTYFVNLNYEEAKLKAESVKSQKNEILNINEEENGQKAIENNKEELKEDREKENISENNN
KQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAEEKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSLT
DYGVLLEHIKRNDELDAAIDIFKILKDKLEEKEYKEMKDILSPYINIELIEEKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24915; Mature: 24915

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGPLSFLVLFFTTLIIGTMTYFVNLNYEEAKLKAESVKSQKNEILNINEEENGQKAIE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
NNKEELKEDREKENISENNNKQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAE
CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
EKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSLTDYGVLLEHIKRNDELDAAID
HHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH
IFKILKDKLEEKEYKEMKDILSPYINIELIEEKI
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
>Mature Secondary Structure
MNKGPLSFLVLFFTTLIIGTMTYFVNLNYEEAKLKAESVKSQKNEILNINEEENGQKAIE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
NNKEELKEDREKENISENNNKQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAE
CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
EKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSLTDYGVLLEHIKRNDELDAAID
HHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH
IFKILKDKLEEKEYKEMKDILSPYINIELIEEKI
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA