| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17548053
Identifier: 17548053
GI number: 17548053
Start: 3598225
End: 3598473
Strand: Reverse
Name: 17548053
Synonym: RSc3336
Alternate gene names: NA
Gene position: 3598473-3598225 (Counterclockwise)
Preceding gene: 17548054
Following gene: 17548051
Centisome position: 96.83
GC content: 69.48
Gene sequence:
>249_bases ATGGCGCTGAGCCGCGACGATATCCGCACGCTGTTTGATCGCCATGGCGACATCGCCTGCAGCGGCGAGCCCGTCACGCA GCGTGAGCATGCGCCGCAGACGGCTGCGCTCGTCACCGCCGCGCTGCCGCACGACCTCGGCCACCTGCTGGGCCGGCAAG GCGAAACGCCCAGCGGACGCGGCATCGACGACCAGCACCAGTATTTCGCGTTGCCGTTCCTGCGCGCGCTTTCCCGATGC CGGGCTTGA
Upstream 100 bases:
>100_bases CCTGCCTGCGGGTCTCCGGACGCACGCCGGGCTGGCGATCCGCACATCCGGTCATGGCGCTGCCGCAGCCGCCGGCTAAG CTGGGCTTCGGGAGGTGACC
Downstream 100 bases:
>100_bases ACCGATCCGCTTGTGCGTGGACGCCAAGCGTTGCCTGTGCGCCACCGATGCGAGCGACCACGCATGCCCGTCGGCCGATT CGGTGCGCAGCCTTGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: HD Phosphohydrolase; Metal Dependent Phosphohydrolase
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MALSRDDIRTLFDRHGDIACSGEPVTQREHAPQTAALVTAALPHDLGHLLGRQGETPSGRGIDDQHQYFALPFLRALSRC RA
Sequences:
>Translated_82_residues MALSRDDIRTLFDRHGDIACSGEPVTQREHAPQTAALVTAALPHDLGHLLGRQGETPSGRGIDDQHQYFALPFLRALSRC RA >Mature_81_residues ALSRDDIRTLFDRHGDIACSGEPVTQREHAPQTAALVTAALPHDLGHLLGRQGETPSGRGIDDQHQYFALPFLRALSRCR A
Specific function: Unknown
COG id: COG4341
COG function: function code R; Predicted HD phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9004; Mature: 8873
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSRDDIRTLFDRHGDIACSGEPVTQREHAPQTAALVTAALPHDLGHLLGRQGETPSGR CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC GIDDQHQYFALPFLRALSRCRA CCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALSRDDIRTLFDRHGDIACSGEPVTQREHAPQTAALVTAALPHDLGHLLGRQGETPSGR CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC GIDDQHQYFALPFLRALSRCRA CCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA