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The map label for this gene is yfcA [C]

Identifier: 17548054

GI number: 17548054

Start: 3598574

End: 3599332

Strand: Reverse

Name: yfcA [C]

Synonym: RSc3337

Alternate gene names: 17548054

Gene position: 3599332-3598574 (Counterclockwise)

Preceding gene: 17548055

Following gene: 17548053

Centisome position: 96.85

GC content: 67.85

Gene sequence:

>759_bases
ATGGATTTCGTATTGCTCGCCGTGGCCGGCTTTCTGGCCGGCCTGATCGATGCTGTGGCCGGTGGCGGCGGCCTGGTGCA
GATTCCCGCGCTGTTCTCCGCGTATCCCAATCTCGCGCCGGCCACGCTGATCGGCACCAACAAGCTCGCCTCGATGTCCG
GCACCGCCACGGCGGCGGCGCGCTATGGCCGCACGGTGCGCATCTATTGGGGCGCGACGGCGCCGGCGGTGGTGACGGCG
TTCCTGTGCTCGCTGCTGGGGGCCTGGGCGCTCACGCACATCCCCGCTGAACCGCTGCGTCGCGCGCTGCCCTTCGTGCT
GGTGCTGCTGCTGGTCTACACCGTCGCCAAGAAGGATCTCGGCGCCGAGCATGCGCCCAGCCTCGCCGGCTGGCGCGAGC
GTGGGGTGGCGCTGCTGGCCGGCGCCATCATCGGCTTCTACGACGGCGTGTTCGGCCCGGGCACCGGCAGCTTCCTGATG
ATCGTGTTCGTGCGGGTGTTCGGCTACGACTTCCTGCATGCTTCCGCATCCACCAAGATCGTCAACCTGGCGACCAACGT
GGCGGCCTTGCTGCTGCTGGCGAGCAAGGGGCACGTGTGGTGGCAGCTGGGCCTGGTGATGGCGGTGGCCAATGTGCTCG
GCAACCAGGCGGGCAGCTACCTGGCGCTCAAGCACGGTAGCCGCTTCGTGCGCAAGATGTTCATCGCCGTGGTGTTGGCG
CTGATCCTGAAGACCGCTTACGACGCTTTCCTGCGCTGA

Upstream 100 bases:

>100_bases
GCCGGAGGCCGGCGGGTGCTGGCTGCGCGCCGAGCGCCCGACGCCGAAGTCGCTGGGCTAGCCGCATCCGCCGACCTGTC
CTGTTCCCGTTGGTTTCCTG

Downstream 100 bases:

>100_bases
CCTGCCTGCGGGTCTCCGGACGCACGCCGGGCTGGCGATCCGCACATCCGGTCATGGCGCTGCCGCAGCCGCCGGCTAAG
CTGGGCTTCGGGAGGTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF9 [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDFVLLAVAGFLAGLIDAVAGGGGLVQIPALFSAYPNLAPATLIGTNKLASMSGTATAAARYGRTVRIYWGATAPAVVTA
FLCSLLGAWALTHIPAEPLRRALPFVLVLLLVYTVAKKDLGAEHAPSLAGWRERGVALLAGAIIGFYDGVFGPGTGSFLM
IVFVRVFGYDFLHASASTKIVNLATNVAALLLLASKGHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKMFIAVVLA
LILKTAYDAFLR

Sequences:

>Translated_252_residues
MDFVLLAVAGFLAGLIDAVAGGGGLVQIPALFSAYPNLAPATLIGTNKLASMSGTATAAARYGRTVRIYWGATAPAVVTA
FLCSLLGAWALTHIPAEPLRRALPFVLVLLLVYTVAKKDLGAEHAPSLAGWRERGVALLAGAIIGFYDGVFGPGTGSFLM
IVFVRVFGYDFLHASASTKIVNLATNVAALLLLASKGHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKMFIAVVLA
LILKTAYDAFLR
>Mature_252_residues
MDFVLLAVAGFLAGLIDAVAGGGGLVQIPALFSAYPNLAPATLIGTNKLASMSGTATAAARYGRTVRIYWGATAPAVVTA
FLCSLLGAWALTHIPAEPLRRALPFVLVLLLVYTVAKKDLGAEHAPSLAGWRERGVALLAGAIIGFYDGVFGPGTGSFLM
IVFVRVFGYDFLHASASTKIVNLATNVAALLLLASKGHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKMFIAVVLA
LILKTAYDAFLR

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=243, Percent_Identity=35.3909465020576, Blast_Score=134, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26473; Mature: 26473

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFVLLAVAGFLAGLIDAVAGGGGLVQIPALFSAYPNLAPATLIGTNKLASMSGTATAAA
CHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHEECCCHHHHCCCHHHHHH
RYGRTVRIYWGATAPAVVTAFLCSLLGAWALTHIPAEPLRRALPFVLVLLLVYTVAKKDL
HCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GAEHAPSLAGWRERGVALLAGAIIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKI
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
VNLATNVAALLLLASKGHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKMFIAVVLA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
LILKTAYDAFLR
HHHHHHHHHHCC
>Mature Secondary Structure
MDFVLLAVAGFLAGLIDAVAGGGGLVQIPALFSAYPNLAPATLIGTNKLASMSGTATAAA
CHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHEECCCHHHHCCCHHHHHH
RYGRTVRIYWGATAPAVVTAFLCSLLGAWALTHIPAEPLRRALPFVLVLLLVYTVAKKDL
HCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GAEHAPSLAGWRERGVALLAGAIIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKI
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
VNLATNVAALLLLASKGHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKMFIAVVLA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
LILKTAYDAFLR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]