| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is eamA [H]
Identifier: 17547978
GI number: 17547978
Start: 3514083
End: 3515009
Strand: Reverse
Name: eamA [H]
Synonym: RSc3261
Alternate gene names: 17547978
Gene position: 3515009-3514083 (Counterclockwise)
Preceding gene: 17547979
Following gene: 17547977
Centisome position: 94.58
GC content: 69.9
Gene sequence:
>927_bases TTGGACGGCTGTTCTCTTCCGGATGTGCCCATGTCCCCCAAGGATCTGCTGCTGGCCCTTACCGTCGTGCTGGTGTGGGG CGTCAACTTCGTCATCATCAAGGTCGGCCTGCACGGCGTGCCGCCGATGCTGCTCGGCGCGCTGCGCTTCGCGCTGGTGG CCTTCCCGGCCATCCTGTTCGTGCCGCGTCCGAAGATCGCACTGAAGTGGCTGCTTGCTTACGGTGCAACCATCAGTTTC GGCCAGTTCGCCTTCCTGTTCTCGGCCATGTACGTGGGCATGCCGGCGGGGCTGGCGTCCCTGGTGCTGCAGTCGCAGGC GTTCTTTACGCTGACGATCGCGGCGGTCGTGCTGCGCGAGCCCATCCGCTGGTACCACCTGGCCGGCATGGCGGTGGCGG CCTGCGGGCTGGCCATGATCGGCGTGGCCGGCACGAGCGGCGCAGGGGCCGCGACCGGCATGACCACCGCCGGCTTCCTG CTGACACTGTGCGCGGCGCTCTCGTGGTCGAGCGGCAACATCGTCACCAAGCGCATCGGGCCGGTCAACGTGGTCAGCCT GGTGGTGTGGGGCGCGCTGATCCCGCCGGTGCCGTTCTTCCTGCTGTCGTACTGGATGGAGGGGCCGCAGCAGATCGCGC ACAGCCTGGCCAACCTCGGCGGGACGAGCATCGGCGCGATCGTCTACCTGGCGTTCGGCGCCACCATCTTCGGCTACAGC CTGTGGAGCCGGCTGCTGGCGCGCTACGCCGCCAGCCAGGTCGCGCCCCTGACGCTGCTGGTGCCGGTGGTGGGGCTGGT GTCGGCGGCGCTGCTGCTGGGCGAGCGGCTGGTGCCGGCCCAGTGGCTGGGCGGCGCGGTCGTGATGGCGGGGCTGCTGC TGAACGTGTTCGGCGGGCGGCTGGCAGCGCGGCTGGCGCTGGTCTGA
Upstream 100 bases:
>100_bases TGAGCGGTAGCGGACAGGCCGTCCGGCAGCGGCATGAACAATGCGCAAGAATGGGCAAGCCGCCGTGCCGGCAGGCGCCT AAAGTGCCACATGAGGCCGC
Downstream 100 bases:
>100_bases TCCGCCAGCCGGGGCATCCGGAACGCCCGCGCCGCGCCGGCTCCGGGCGTTGTGCCGCCCACATGGCCGGCATCGGCCGA TGCCGGGATTCGGGCACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MDGCSLPDVPMSPKDLLLALTVVLVWGVNFVIIKVGLHGVPPMLLGALRFALVAFPAILFVPRPKIALKWLLAYGATISF GQFAFLFSAMYVGMPAGLASLVLQSQAFFTLTIAAVVLREPIRWYHLAGMAVAACGLAMIGVAGTSGAGAATGMTTAGFL LTLCAALSWSSGNIVTKRIGPVNVVSLVVWGALIPPVPFFLLSYWMEGPQQIAHSLANLGGTSIGAIVYLAFGATIFGYS LWSRLLARYAASQVAPLTLLVPVVGLVSAALLLGERLVPAQWLGGAVVMAGLLLNVFGGRLAARLALV
Sequences:
>Translated_308_residues MDGCSLPDVPMSPKDLLLALTVVLVWGVNFVIIKVGLHGVPPMLLGALRFALVAFPAILFVPRPKIALKWLLAYGATISF GQFAFLFSAMYVGMPAGLASLVLQSQAFFTLTIAAVVLREPIRWYHLAGMAVAACGLAMIGVAGTSGAGAATGMTTAGFL LTLCAALSWSSGNIVTKRIGPVNVVSLVVWGALIPPVPFFLLSYWMEGPQQIAHSLANLGGTSIGAIVYLAFGATIFGYS LWSRLLARYAASQVAPLTLLVPVVGLVSAALLLGERLVPAQWLGGAVVMAGLLLNVFGGRLAARLALV >Mature_308_residues MDGCSLPDVPMSPKDLLLALTVVLVWGVNFVIIKVGLHGVPPMLLGALRFALVAFPAILFVPRPKIALKWLLAYGATISF GQFAFLFSAMYVGMPAGLASLVLQSQAFFTLTIAAVVLREPIRWYHLAGMAVAACGLAMIGVAGTSGAGAATGMTTAGFL LTLCAALSWSSGNIVTKRIGPVNVVSLVVWGALIPPVPFFLLSYWMEGPQQIAHSLANLGGTSIGAIVYLAFGATIFGYS LWSRLLARYAASQVAPLTLLVPVVGLVSAALLLGERLVPAQWLGGAVVMAGLLLNVFGGRLAARLALV
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=294, Percent_Identity=54.7619047619048, Blast_Score=273, Evalue=9e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32104; Mature: 32104
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGCSLPDVPMSPKDLLLALTVVLVWGVNFVIIKVGLHGVPPMLLGALRFALVAFPAILF CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHH VPRPKIALKWLLAYGATISFGQFAFLFSAMYVGMPAGLASLVLQSQAFFTLTIAAVVLRE CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH PIRWYHLAGMAVAACGLAMIGVAGTSGAGAATGMTTAGFLLTLCAALSWSSGNIVTKRIG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCC PVNVVSLVVWGALIPPVPFFLLSYWMEGPQQIAHSLANLGGTSIGAIVYLAFGATIFGYS CHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LWSRLLARYAASQVAPLTLLVPVVGLVSAALLLGERLVPAQWLGGAVVMAGLLLNVFGGR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LAARLALV HHHHHHCC >Mature Secondary Structure MDGCSLPDVPMSPKDLLLALTVVLVWGVNFVIIKVGLHGVPPMLLGALRFALVAFPAILF CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHH VPRPKIALKWLLAYGATISFGQFAFLFSAMYVGMPAGLASLVLQSQAFFTLTIAAVVLRE CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH PIRWYHLAGMAVAACGLAMIGVAGTSGAGAATGMTTAGFLLTLCAALSWSSGNIVTKRIG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCC PVNVVSLVVWGALIPPVPFFLLSYWMEGPQQIAHSLANLGGTSIGAIVYLAFGATIFGYS CHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LWSRLLARYAASQVAPLTLLVPVVGLVSAALLLGERLVPAQWLGGAVVMAGLLLNVFGGR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LAARLALV HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]