| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is gspN
Identifier: 17547832
GI number: 17547832
Start: 3349300
End: 3350151
Strand: Direct
Name: gspN
Synonym: RSc3113
Alternate gene names: NA
Gene position: 3349300-3350151 (Clockwise)
Preceding gene: 17547831
Following gene: 17547833
Centisome position: 90.12
GC content: 74.41
Gene sequence:
>852_bases GTGCCGGTGAGCATCGAAGCGCTGCCGCCGCTGCGCCTGCGACGGCGCGGGCCGGACGAAGACGAACGTGCGGGTCTGGG CTGGCGCATCGGCGCGGCCGCGGCCGCGTTAGCCGCGGTGGCCGTGACGGTGGTGGCGCAGTATCCGGCCGCATGGGCGG CCGAACGCGTGGCCGAGGCCACCGGCCACCGCGTGCTGCTGGCCGATGCCCAGGGCAGTCTCTGGCAAGGCAGCGCCACG CTGGCGCTGACCGCAGGCCCCGGCGCCGCCGATGCGACGGTGCTGCCCGGGCGGCTGTCGTGGTCGCTGGATGCCTGGCC GCTGCTCACGGGCACGGTGCGCGCCCACCTGACGCACGACCGCGCGATGGCGCAGCCGGTCACGCTGGCGGTATCGCGCG ACGGCTGGCAGGCCGATGCCGGGGCGATAACGCTGCCGGCCTCGCTGCTGGCGGGCATCGGTGCGCCGTTCAACACGCTC AGGCTGGACGGCCAGTTGCGCGCGCAATGGACGCCGCTGTCCGGCCGGTTCGGGCACGGCAAGGGCGCGCCGGACACGAT GCAGGGCGCGCTGACCCTCATGCTTGAGCAGGTATCATCCAGCCTCAGCCGCGTGCGGCCGCTGGGCAGCTACCGCGCGG AGCTGGCATTCGGCGGCGCGGCGGGCGGACCGGCCCGGCTGACGCTGTCGACCCTCACCGGCCCGCTATCGCTGCAGGGC CAGGGAACGGTGGGCCGGGGTGCGCATTTTGACGGCGTGGCGCGTGCCACGCCGGAGTCGGAACCGCTGTTGATCGGGCT GCTGAGCCTGATGGGCCCGCGCGACGGCACGGGCTATCGCCTACGCTTTTGA
Upstream 100 bases:
>100_bases GGTGATCGACGCCAGCATCCGCTACGTGGGCGCGACCGCGCTGGTGAACGTCACGGCAACGCTGCAAGGGCCGGGCGCCG GCGCCAGCGGCTACTGACGC
Downstream 100 bases:
>100_bases CCAGCCGGCGCACGCCACGCGGCGCCGGCATCCATGAACGACGAGACCATGCACAACGCCTCTTCCCGACACACCGTCCG CGCCATTGTCCTGGCATGCT
Product: general secretion pathway protein N
Products: NA
Alternate protein names: General Secretory Pathway Protein N; Type II Secretion System Protein N; General Secretion Pathway Protein N
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MPVSIEALPPLRLRRRGPDEDERAGLGWRIGAAAAALAAVAVTVVAQYPAAWAAERVAEATGHRVLLADAQGSLWQGSAT LALTAGPGAADATVLPGRLSWSLDAWPLLTGTVRAHLTHDRAMAQPVTLAVSRDGWQADAGAITLPASLLAGIGAPFNTL RLDGQLRAQWTPLSGRFGHGKGAPDTMQGALTLMLEQVSSSLSRVRPLGSYRAELAFGGAAGGPARLTLSTLTGPLSLQG QGTVGRGAHFDGVARATPESEPLLIGLLSLMGPRDGTGYRLRF
Sequences:
>Translated_283_residues MPVSIEALPPLRLRRRGPDEDERAGLGWRIGAAAAALAAVAVTVVAQYPAAWAAERVAEATGHRVLLADAQGSLWQGSAT LALTAGPGAADATVLPGRLSWSLDAWPLLTGTVRAHLTHDRAMAQPVTLAVSRDGWQADAGAITLPASLLAGIGAPFNTL RLDGQLRAQWTPLSGRFGHGKGAPDTMQGALTLMLEQVSSSLSRVRPLGSYRAELAFGGAAGGPARLTLSTLTGPLSLQG QGTVGRGAHFDGVARATPESEPLLIGLLSLMGPRDGTGYRLRF >Mature_282_residues PVSIEALPPLRLRRRGPDEDERAGLGWRIGAAAAALAAVAVTVVAQYPAAWAAERVAEATGHRVLLADAQGSLWQGSATL ALTAGPGAADATVLPGRLSWSLDAWPLLTGTVRAHLTHDRAMAQPVTLAVSRDGWQADAGAITLPASLLAGIGAPFNTLR LDGQLRAQWTPLSGRFGHGKGAPDTMQGALTLMLEQVSSSLSRVRPLGSYRAELAFGGAAGGPARLTLSTLTGPLSLQGQ GTVGRGAHFDGVARATPESEPLLIGLLSLMGPRDGTGYRLRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29267; Mature: 29136
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSIEALPPLRLRRRGPDEDERAGLGWRIGAAAAALAAVAVTVVAQYPAAWAAERVAEA CCEECCCCCCHHHHCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TGHRVLLADAQGSLWQGSATLALTAGPGAADATVLPGRLSWSLDAWPLLTGTVRAHLTHD CCCEEEEECCCCCEECCCEEEEEEECCCCCCCEEECCCEEECCCCCCHHHHHHHEEEEHH RAMAQPVTLAVSRDGWQADAGAITLPASLLAGIGAPFNTLRLDGQLRAQWTPLSGRFGHG HHHCCCEEEEEECCCCCCCCCEEEECHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCC KGAPDTMQGALTLMLEQVSSSLSRVRPLGSYRAELAFGGAAGGPARLTLSTLTGPLSLQG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCEEEEEECCCCEEECC QGTVGRGAHFDGVARATPESEPLLIGLLSLMGPRDGTGYRLRF CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEC >Mature Secondary Structure PVSIEALPPLRLRRRGPDEDERAGLGWRIGAAAAALAAVAVTVVAQYPAAWAAERVAEA CEECCCCCCHHHHCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TGHRVLLADAQGSLWQGSATLALTAGPGAADATVLPGRLSWSLDAWPLLTGTVRAHLTHD CCCEEEEECCCCCEECCCEEEEEEECCCCCCCEEECCCEEECCCCCCHHHHHHHEEEEHH RAMAQPVTLAVSRDGWQADAGAITLPASLLAGIGAPFNTLRLDGQLRAQWTPLSGRFGHG HHHCCCEEEEEECCCCCCCCCEEEECHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCC KGAPDTMQGALTLMLEQVSSSLSRVRPLGSYRAELAFGGAAGGPARLTLSTLTGPLSLQG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCEEEEEECCCCEEECC QGTVGRGAHFDGVARATPESEPLLIGLLSLMGPRDGTGYRLRF CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA