| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is gspM [C]
Identifier: 17547831
GI number: 17547831
Start: 3348718
End: 3349296
Strand: Direct
Name: gspM [C]
Synonym: RSc3112
Alternate gene names: 17547831
Gene position: 3348718-3349296 (Clockwise)
Preceding gene: 17547830
Following gene: 17547832
Centisome position: 90.11
GC content: 70.81
Gene sequence:
>579_bases ATGGCAACTTCCCCCAACGCTTCCAATGCCTCCGGCGGGCGCCGCCGGCTGCCCCGCATCGGCGTGCCCGACGCGCTGCG CGATGCCGTGGCCGCTTTCTGGATGCAGCGCGAGCCGCGCGAGCGCCGCATCCTGGCCGGCGGCGGCGCGATCCTGCTGC TGGTCATCGTCTATCTGCTGTTCTGGGAACCGGCCTTCGAAGGCCGCCGGCGCATTGAAAAGGCGCTGCCCGAAATGCGC GGCCAGCTCGCCGAGATGGAAACGCTCGGCCAGGAAGCGCGCGAGCTGTCCGCCATTGCCGCCACGCCGGTGCCGCACGG CAACGACCTGCAGGACGCGCTCAACACCAGCCTGACCGCGCACGGACTGAAGGCCACGCGCATGGCCCTGTCCGGCGAGA GCGTGCAGGTGCAGCTCGACAAGGTTCCGTTCGGCGCGGTGGCCGAGTGGCTGCAGGAAGTGCGGCAGGCGCAGCGCATG AAGGTGATCGACGCCAGCATCCGCTACGTGGGCGCGACCGCGCTGGTGAACGTCACGGCAACGCTGCAAGGGCCGGGCGC CGGCGCCAGCGGCTACTGA
Upstream 100 bases:
>100_bases TCGGCCTGAAGATGGAGACCGCCGAAGCACCGCGCGGCGGCGAAGCGGCCGTGCCCGGCTCGCGCTGGACGGTCTCCATC GCGCAATAACGATCGCTCGT
Downstream 100 bases:
>100_bases CGCGTGCCGGTGAGCATCGAAGCGCTGCCGCCGCTGCGCCTGCGACGGCGCGGGCCGGACGAAGACGAACGTGCGGGTCT GGGCTGGCGCATCGGCGCGG
Product: general secretion pathway protein M
Products: NA
Alternate protein names: General Secretion Pathway Protein M; General Secretory Pathway Protein M
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MATSPNASNASGGRRRLPRIGVPDALRDAVAAFWMQREPRERRILAGGGAILLLVIVYLLFWEPAFEGRRRIEKALPEMR GQLAEMETLGQEARELSAIAATPVPHGNDLQDALNTSLTAHGLKATRMALSGESVQVQLDKVPFGAVAEWLQEVRQAQRM KVIDASIRYVGATALVNVTATLQGPGAGASGY
Sequences:
>Translated_192_residues MATSPNASNASGGRRRLPRIGVPDALRDAVAAFWMQREPRERRILAGGGAILLLVIVYLLFWEPAFEGRRRIEKALPEMR GQLAEMETLGQEARELSAIAATPVPHGNDLQDALNTSLTAHGLKATRMALSGESVQVQLDKVPFGAVAEWLQEVRQAQRM KVIDASIRYVGATALVNVTATLQGPGAGASGY >Mature_191_residues ATSPNASNASGGRRRLPRIGVPDALRDAVAAFWMQREPRERRILAGGGAILLLVIVYLLFWEPAFEGRRRIEKALPEMRG QLAEMETLGQEARELSAIAATPVPHGNDLQDALNTSLTAHGLKATRMALSGESVQVQLDKVPFGAVAEWLQEVRQAQRMK VIDASIRYVGATALVNVTATLQGPGAGASGY
Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]
COG id: COG3149
COG function: function code U; Type II secretory pathway, component PulM
Gene ontology:
Cell location: Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20684; Mature: 20553
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSPNASNASGGRRRLPRIGVPDALRDAVAAFWMQREPRERRILAGGGAILLLVIVYLL CCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCHHCEEECCCHHHHHHHHHHHH FWEPAFEGRRRIEKALPEMRGQLAEMETLGQEARELSAIAATPVPHGNDLQDALNTSLTA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH HGLKATRMALSGESVQVQLDKVPFGAVAEWLQEVRQAQRMKVIDASIRYVGATALVNVTA CCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE TLQGPGAGASGY EECCCCCCCCCC >Mature Secondary Structure ATSPNASNASGGRRRLPRIGVPDALRDAVAAFWMQREPRERRILAGGGAILLLVIVYLL CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCHHCEEECCCHHHHHHHHHHHH FWEPAFEGRRRIEKALPEMRGQLAEMETLGQEARELSAIAATPVPHGNDLQDALNTSLTA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH HGLKATRMALSGESVQVQLDKVPFGAVAEWLQEVRQAQRMKVIDASIRYVGATALVNVTA CCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE TLQGPGAGASGY EECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA