| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is cpg2 [H]
Identifier: 17547812
GI number: 17547812
Start: 3330055
End: 3331365
Strand: Reverse
Name: cpg2 [H]
Synonym: RSc3093
Alternate gene names: 17547812
Gene position: 3331365-3330055 (Counterclockwise)
Preceding gene: 17547815
Following gene: 17547810
Centisome position: 89.64
GC content: 68.27
Gene sequence:
>1311_bases ATGAGAGCCATGTCGTTCGCGCGGGGAGTGCGCCCGGTCATGCTGTCCTTGCTGGTGGCGGCCGGCGCGCTGGCCGCGGG CCAGGCGGCCGCCGTGCCGCCGGCCGAGATCTACAAGCGCGCCCAGCAGGAGAAGCCGGCCCTGATCGACACCATGAAGA CGCTGGTGTCGATTGAATCGGGCAGCAGGGACCTTGAGGGCCTGGACAGGATCGCAGGCGTGATCGCCGACCGCCTGCGC CTGCTGGGCGGTGACGTGAAGCTGGTCGACCCCACCGACCACGCCTACCGCATGGCCGACACCCCCGAGAAGATCGGCAA GATGGTGCTGGCGCGCTTCAAGGGCGAGGGCAAGCGCAACATCATGCTGATCGCGCACATGGACACGGTGTACCTCAAGG GCATGCTGGCGCAGCAGCCGTTCCGCATCGACGGCGACCGCGCCTACGGTCTGGGCATTGCCGACGACAAGAACGGCGTG GCGGTGATCCTGCACACGGTGTCCATCCTGCAGTCGGTCGGCTTCAAGCAGTACGGCACGCTGACCGTGCTGATCAACGG CGACGAAGAAATCAGCTCGCCCGGCGCACGCACCCTGCTGGCCAAGCTGGGCGCCGAGCAGGATGCGGTGTTCTCGTGCG AGGGCACGCGTGCCAGCACCGACAAGCTGTCGCTTGCCACCAGCGGCATCGGCGCGATCCTGCTGGATGTGAAGGGCAAG GCATCCCATGCGGGCGGCGCACCGGAGCAGGGCCGCAACGCCCTGTATGAACTGTCTCACCAGGTGCTGCAACTGCGCGA CCTGTCCAACCCGCAGACGGGGCTGAAGGTCAACTGGACACTGGCCCAGGCCGGCACCAACCGCAACGTGATCCCCGCCA CCGCGAGCGCCCAGGCCGATGTGCGCCTGCTGCGCGCGGCCGACGCCGACAAGCTGGAAGACACCATCAACGAGCGCATC AAGACCCGGCTGATCCCCGATACGCTGGTCACGGCCCGGTTCGAACGCCGCCGGCCGCCGCTGGAGGCGACGCCGGCGTC GCATCGTCTCGGCGAACATGCGCAGAAGATCTACGGCGAACTCGGCAAGTCGCTTGAGATCGACGACAAGGCGGAGGGCG GCGGCACCGACGCCGCATTCGCCGCCTCCAGGACACAGGCGCCGGTTCTCGAGCGCTTCGGCCTGGCCGGCGCCGGCGCG CACTCGAACGAGGCGGAATACGTCGACCTGAACTCCATCGTGCCGCGCCTGTATCTGCTGTCGCGCATGGTCATGGACGT CTCGCGCGACCGCGTGGGCGGCGCCCGGTAA
Upstream 100 bases:
>100_bases TCCGAACAGGGGATGGCACCGCCGATGGCCCCCGGGCCGCCGTGCGAAAATCGGTGCTTTGTTGCAAACCATAACTAAGA GAACAGGTGAGGAAACTTCC
Downstream 100 bases:
>100_bases CGCTGCGACGAGGCGGCACACGGGGCCCGCCCATGCGCGCCGCCGATCACGCCGGACAAGTCTCCGCGATCGGCTCCCAT GAAAAAGCCCTGCCGGCGCA
Product: glutamate carboxypeptidase
Products: NA
Alternate protein names: CPDG2; Folate hydrolase G2; Glutamate carboxypeptidase; Pteroylmonoglutamic acid hydrolase G2; Glucarpidase [H]
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MRAMSFARGVRPVMLSLLVAAGALAAGQAAAVPPAEIYKRAQQEKPALIDTMKTLVSIESGSRDLEGLDRIAGVIADRLR LLGGDVKLVDPTDHAYRMADTPEKIGKMVLARFKGEGKRNIMLIAHMDTVYLKGMLAQQPFRIDGDRAYGLGIADDKNGV AVILHTVSILQSVGFKQYGTLTVLINGDEEISSPGARTLLAKLGAEQDAVFSCEGTRASTDKLSLATSGIGAILLDVKGK ASHAGGAPEQGRNALYELSHQVLQLRDLSNPQTGLKVNWTLAQAGTNRNVIPATASAQADVRLLRAADADKLEDTINERI KTRLIPDTLVTARFERRRPPLEATPASHRLGEHAQKIYGELGKSLEIDDKAEGGGTDAAFAASRTQAPVLERFGLAGAGA HSNEAEYVDLNSIVPRLYLLSRMVMDVSRDRVGGAR
Sequences:
>Translated_436_residues MRAMSFARGVRPVMLSLLVAAGALAAGQAAAVPPAEIYKRAQQEKPALIDTMKTLVSIESGSRDLEGLDRIAGVIADRLR LLGGDVKLVDPTDHAYRMADTPEKIGKMVLARFKGEGKRNIMLIAHMDTVYLKGMLAQQPFRIDGDRAYGLGIADDKNGV AVILHTVSILQSVGFKQYGTLTVLINGDEEISSPGARTLLAKLGAEQDAVFSCEGTRASTDKLSLATSGIGAILLDVKGK ASHAGGAPEQGRNALYELSHQVLQLRDLSNPQTGLKVNWTLAQAGTNRNVIPATASAQADVRLLRAADADKLEDTINERI KTRLIPDTLVTARFERRRPPLEATPASHRLGEHAQKIYGELGKSLEIDDKAEGGGTDAAFAASRTQAPVLERFGLAGAGA HSNEAEYVDLNSIVPRLYLLSRMVMDVSRDRVGGAR >Mature_436_residues MRAMSFARGVRPVMLSLLVAAGALAAGQAAAVPPAEIYKRAQQEKPALIDTMKTLVSIESGSRDLEGLDRIAGVIADRLR LLGGDVKLVDPTDHAYRMADTPEKIGKMVLARFKGEGKRNIMLIAHMDTVYLKGMLAQQPFRIDGDRAYGLGIADDKNGV AVILHTVSILQSVGFKQYGTLTVLINGDEEISSPGARTLLAKLGAEQDAVFSCEGTRASTDKLSLATSGIGAILLDVKGK ASHAGGAPEQGRNALYELSHQVLQLRDLSNPQTGLKVNWTLAQAGTNRNVIPATASAQADVRLLRAADADKLEDTINERI KTRLIPDTLVTARFERRRPPLEATPASHRLGEHAQKIYGELGKSLEIDDKAEGGGTDAAFAASRTQAPVLERFGLAGAGA HSNEAEYVDLNSIVPRLYLLSRMVMDVSRDRVGGAR
Specific function: Catalyzes the hydrolysis of reduced and non-reduced folates to pteroates and L-glutamate. This enzyme has a broad specificity [H]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family [H]
Homologues:
Organism=Escherichia coli, GI1790395, Length=410, Percent_Identity=26.3414634146341, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001261 - InterPro: IPR017150 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.4.17.11 [H]
Molecular weight: Translated: 46673; Mature: 46673
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00758 ARGE_DAPE_CPG2_1 ; PS00759 ARGE_DAPE_CPG2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAMSFARGVRPVMLSLLVAAGALAAGQAAAVPPAEIYKRAQQEKPALIDTMKTLVSIES CCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC GSRDLEGLDRIAGVIADRLRLLGGDVKLVDPTDHAYRMADTPEKIGKMVLARFKGEGKRN CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCE IMLIAHMDTVYLKGMLAQQPFRIDGDRAYGLGIADDKNGVAVILHTVSILQSVGFKQYGT EEEEEECHHHHHHHHHHCCCEEECCCCEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCE LTVLINGDEEISSPGARTLLAKLGAEQDAVFSCEGTRASTDKLSLATSGIGAILLDVKGK EEEEECCCHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHCCCEEEEEEECCC ASHAGGAPEQGRNALYELSHQVLQLRDLSNPQTGLKVNWTLAQAGTNRNVIPATASAQAD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCHHH VRLLRAADADKLEDTINERIKTRLIPDTLVTARFERRRPPLEATPASHRLGEHAQKIYGE HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LGKSLEIDDKAEGGGTDAAFAASRTQAPVLERFGLAGAGAHSNEAEYVDLNSIVPRLYLL HCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHH SRMVMDVSRDRVGGAR HHHHHHHHHHHCCCCC >Mature Secondary Structure MRAMSFARGVRPVMLSLLVAAGALAAGQAAAVPPAEIYKRAQQEKPALIDTMKTLVSIES CCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC GSRDLEGLDRIAGVIADRLRLLGGDVKLVDPTDHAYRMADTPEKIGKMVLARFKGEGKRN CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCE IMLIAHMDTVYLKGMLAQQPFRIDGDRAYGLGIADDKNGVAVILHTVSILQSVGFKQYGT EEEEEECHHHHHHHHHHCCCEEECCCCEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCE LTVLINGDEEISSPGARTLLAKLGAEQDAVFSCEGTRASTDKLSLATSGIGAILLDVKGK EEEEECCCHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHCCCEEEEEEECCC ASHAGGAPEQGRNALYELSHQVLQLRDLSNPQTGLKVNWTLAQAGTNRNVIPATASAQAD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCHHH VRLLRAADADKLEDTINERIKTRLIPDTLVTARFERRRPPLEATPASHRLGEHAQKIYGE HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LGKSLEIDDKAEGGGTDAAFAASRTQAPVLERFGLAGAGAHSNEAEYVDLNSIVPRLYLL HCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHH SRMVMDVSRDRVGGAR HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6396165; 3838935; 9083113 [H]