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The map label for this gene is omp32 [H]

Identifier: 17547810

GI number: 17547810

Start: 3327984

End: 3329114

Strand: Reverse

Name: omp32 [H]

Synonym: RSc3091

Alternate gene names: 17547810

Gene position: 3329114-3327984 (Counterclockwise)

Preceding gene: 17547812

Following gene: 17547809

Centisome position: 89.58

GC content: 62.6

Gene sequence:

>1131_bases
ATGAAAAAGTCTGCCATTCTGGTTGCAGTCGGCGCCCTGTTCGCAGGTTCGGCCTACGCCCAATCGAGCGTGACGCTGTA
CGGCATTGTCGATGCCACCATTCACTACACCACCAACGCGAACCAAGCCGGCAACAGCCTGCTGCGTATGGACAACGGCG
CGGTGTCCAACAGCCGCTGGGGTCTGAAAGGCTCGGAAGATCTGGGTGGCGGCAACAAGGCGCTGTTCGTGCTGGAAAGC
GGCTTTGATCCGGACACCGGCCGCGTCAACAGCGGCGGGTTGTTCAACCGTCAATCCTTCGTGGGCCTGTCCAACAAGGA
CTACGGCACGCTGACGATGGGCCGCCAATACAACTTCGGCTTCACGATGGGCGGCAACTTCGACCCGCTGGGCGTGGGCA
ACTACGACGAAAACTCGTGGCTCTACTACGGCGTGACGGGTCTGCGCGTGTCGAACATGCTCAAGTACGAAGGCAAGTGG
AACGGCCTGTACGTTGGCCTGGGCTACGGCTTCGGCGAGCAGGCCGGCAGCACGGCAAACAACCGCTACATGGGCGGCGC
GGTGTCGTATGAATTCGGCCCGGCCCTGATCGGCGCGTTCTACCAGCAACAGCAGGATTCCACCGCCGCCGGCAACAAGC
AGAAGGTGTGGGGTATCGGCGGCAACTACACCATTGGTGCTGCCAAGCTGTTCGCGGGCTACATCGACAGCAGCGATAAC
ACGGGCTGCGTGAACAGCAGCACCTGCGCGGGCGACCGCAGCACCTTTGGCCTGAACCTGTATAACAACGCATCGGGTCC
TGGTCTGACCCCGGGCGCCACCAAGCGTCGCGACCACATCGGTCTGGCTGGCCTGACCTACCAGGTCACGCCGGCGCTGG
CGCTGACGGGTGCGTTCTACTACGACAGCATCAGCAACGCTGCGCTGGACGCCGGCAACGACGGCAAGCGCTACACCGGT
GTCCTGCTTGCCGAGTACTCGCTGTCCAAGCGTACCCAGGTGTACGGCACCGTGGCCTACGACAAGGTCAAGAACGCTGC
CATTCCGGAACAACCGGGCGGCACGGGCACGGGCATCAACGCCAAGACCAACCAAATCGGCGTGGGCGCAGGCATCCGTC
ACATCTTCTGA

Upstream 100 bases:

>100_bases
TCCCCGGCGTTTCCAACAAGGAAACACGGGAAATCTGGAGGAGCCCGCCTCATGCACACGGGAGCGGGCGTTTGACACAC
TTTCTTTTCAACGAGCCCAC

Downstream 100 bases:

>100_bases
TCGGCGCAGTTTCTCGATCAGGAATGGAAAAGGCGCCTTTCGGGCAAATGCCGTTCAGTTAAGCATGACTTGGCAGGCTC
GCGGCAACGAGAGCTGAGTC

Product: outer membrane porin signal peptide protein

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKKSAILVAVGALFAGSAYAQSSVTLYGIVDATIHYTTNANQAGNSLLRMDNGAVSNSRWGLKGSEDLGGGNKALFVLES
GFDPDTGRVNSGGLFNRQSFVGLSNKDYGTLTMGRQYNFGFTMGGNFDPLGVGNYDENSWLYYGVTGLRVSNMLKYEGKW
NGLYVGLGYGFGEQAGSTANNRYMGGAVSYEFGPALIGAFYQQQQDSTAAGNKQKVWGIGGNYTIGAAKLFAGYIDSSDN
TGCVNSSTCAGDRSTFGLNLYNNASGPGLTPGATKRRDHIGLAGLTYQVTPALALTGAFYYDSISNAALDAGNDGKRYTG
VLLAEYSLSKRTQVYGTVAYDKVKNAAIPEQPGGTGTGINAKTNQIGVGAGIRHIF

Sequences:

>Translated_376_residues
MKKSAILVAVGALFAGSAYAQSSVTLYGIVDATIHYTTNANQAGNSLLRMDNGAVSNSRWGLKGSEDLGGGNKALFVLES
GFDPDTGRVNSGGLFNRQSFVGLSNKDYGTLTMGRQYNFGFTMGGNFDPLGVGNYDENSWLYYGVTGLRVSNMLKYEGKW
NGLYVGLGYGFGEQAGSTANNRYMGGAVSYEFGPALIGAFYQQQQDSTAAGNKQKVWGIGGNYTIGAAKLFAGYIDSSDN
TGCVNSSTCAGDRSTFGLNLYNNASGPGLTPGATKRRDHIGLAGLTYQVTPALALTGAFYYDSISNAALDAGNDGKRYTG
VLLAEYSLSKRTQVYGTVAYDKVKNAAIPEQPGGTGTGINAKTNQIGVGAGIRHIF
>Mature_376_residues
MKKSAILVAVGALFAGSAYAQSSVTLYGIVDATIHYTTNANQAGNSLLRMDNGAVSNSRWGLKGSEDLGGGNKALFVLES
GFDPDTGRVNSGGLFNRQSFVGLSNKDYGTLTMGRQYNFGFTMGGNFDPLGVGNYDENSWLYYGVTGLRVSNMLKYEGKW
NGLYVGLGYGFGEQAGSTANNRYMGGAVSYEFGPALIGAFYQQQQDSTAAGNKQKVWGIGGNYTIGAAKLFAGYIDSSDN
TGCVNSSTCAGDRSTFGLNLYNNASGPGLTPGATKRRDHIGLAGLTYQVTPALALTGAFYYDSISNAALDAGNDGKRYTG
VLLAEYSLSKRTQVYGTVAYDKVKNAAIPEQPGGTGTGINAKTNQIGVGAGIRHIF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39506; Mature: 39506

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSAILVAVGALFAGSAYAQSSVTLYGIVDATIHYTTNANQAGNSLLRMDNGAVSNSRW
CCCCEEEEEEHHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCC
GLKGSEDLGGGNKALFVLESGFDPDTGRVNSGGLFNRQSFVGLSNKDYGTLTMGRQYNFG
CCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCEEEECCCCCCEEEEECCEECCE
FTMGGNFDPLGVGNYDENSWLYYGVTGLRVSNMLKYEGKWNGLYVGLGYGFGEQAGSTAN
EEECCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCC
NRYMGGAVSYEFGPALIGAFYQQQQDSTAAGNKQKVWGIGGNYTIGAAKLFAGYIDSSDN
CCEECCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEHHHHEEEEEECCCCC
TGCVNSSTCAGDRSTFGLNLYNNASGPGLTPGATKRRDHIGLAGLTYQVTPALALTGAFY
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEHH
YDSISNAALDAGNDGKRYTGVLLAEYSLSKRTQVYGTVAYDKVKNAAIPEQPGGTGTGIN
HHCCCCCEECCCCCCCEEEEEEEEEECCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCC
AKTNQIGVGAGIRHIF
CCCCEEECCCCHHHCC
>Mature Secondary Structure
MKKSAILVAVGALFAGSAYAQSSVTLYGIVDATIHYTTNANQAGNSLLRMDNGAVSNSRW
CCCCEEEEEEHHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCC
GLKGSEDLGGGNKALFVLESGFDPDTGRVNSGGLFNRQSFVGLSNKDYGTLTMGRQYNFG
CCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCEEEECCCCCCEEEEECCEECCE
FTMGGNFDPLGVGNYDENSWLYYGVTGLRVSNMLKYEGKWNGLYVGLGYGFGEQAGSTAN
EEECCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCC
NRYMGGAVSYEFGPALIGAFYQQQQDSTAAGNKQKVWGIGGNYTIGAAKLFAGYIDSSDN
CCEECCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEHHHHEEEEEECCCCC
TGCVNSSTCAGDRSTFGLNLYNNASGPGLTPGATKRRDHIGLAGLTYQVTPALALTGAFY
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEHH
YDSISNAALDAGNDGKRYTGVLLAEYSLSKRTQVYGTVAYDKVKNAAIPEQPGGTGTGIN
HHCCCCCEECCCCCCCEEEEEEEEEECCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCC
AKTNQIGVGAGIRHIF
CCCCEEECCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]