| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547703
Identifier: 17547703
GI number: 17547703
Start: 3216371
End: 3216817
Strand: Reverse
Name: 17547703
Synonym: RSc2984
Alternate gene names: NA
Gene position: 3216817-3216371 (Counterclockwise)
Preceding gene: 17547704
Following gene: 17547702
Centisome position: 86.56
GC content: 67.34
Gene sequence:
>447_bases ATGAGCCAGTCCGCAGCTTTCCCCCGGTTGTCCGCTTCCCGACTCGCGCTTGCCGCCGGCGCCGTGGCGCTCGCCGCGCT GGGTCTGGGCGGCTGCAGCAGCATGGGCATGGGCGGTATGGGCATGGGGATGTCGTCCGCGCCGTCGGCGGTCAAGGTGA CCAACGGCTCGCTGACCGACGCGCATGGCATGACGCTGTACACCTTCGACCGCGACACCATGGCCGGCAAGAGCGCCTGC AACGGCAACTGCGCCAACAACTGGCCGCCGCTGACGGCCAACGATGCCGACAAGGGCTCGGGCGACTACACCATCATCGT CCGCGACGACGGCAAGAAGCAGTGGGCCTATCGCGGCAAGCCGCTCTACCTGTGGTCGAAGGACAAGATGCCCGGCGACC AGACCGGCGACGGGTTCATGAACGCCTGGCATATCGCCAAGCCGTAA
Upstream 100 bases:
>100_bases TCACAAAAAATCACCGGCGGACTGGAATAAAGGCACGCTCCGCGTGTTTACTGCTCTAGAGGGCGCGATCGGCGTGCCCC TCCACACCAAGGAGAACAAG
Downstream 100 bases:
>100_bases GCGCCGCGCCCCGATCGTCCGATCCATGTCCGACCTCGCTGGCCGCCTGATCGCGCTGACGCCGAGGCTGCGGCGTCACG CGCGCGGCCTGGTGGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Blue Copper Domain Protein; Signal Peptide Protein; Secreted Repeat Protein; Exported Lipoprotein; Secreted Protein; Exported Protein
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSQSAAFPRLSASRLALAAGAVALAALGLGGCSSMGMGGMGMGMSSAPSAVKVTNGSLTDAHGMTLYTFDRDTMAGKSAC NGNCANNWPPLTANDADKGSGDYTIIVRDDGKKQWAYRGKPLYLWSKDKMPGDQTGDGFMNAWHIAKP
Sequences:
>Translated_148_residues MSQSAAFPRLSASRLALAAGAVALAALGLGGCSSMGMGGMGMGMSSAPSAVKVTNGSLTDAHGMTLYTFDRDTMAGKSAC NGNCANNWPPLTANDADKGSGDYTIIVRDDGKKQWAYRGKPLYLWSKDKMPGDQTGDGFMNAWHIAKP >Mature_147_residues SQSAAFPRLSASRLALAAGAVALAALGLGGCSSMGMGGMGMGMSSAPSAVKVTNGSLTDAHGMTLYTFDRDTMAGKSACN GNCANNWPPLTANDADKGSGDYTIIVRDDGKKQWAYRGKPLYLWSKDKMPGDQTGDGFMNAWHIAKP
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15372; Mature: 15240
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSAAFPRLSASRLALAAGAVALAALGLGGCSSMGMGGMGMGMSSAPSAVKVTNGSLTD CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC AHGMTLYTFDRDTMAGKSACNGNCANNWPPLTANDADKGSGDYTIIVRDDGKKQWAYRGK CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCC PLYLWSKDKMPGDQTGDGFMNAWHIAKP EEEEEECCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure SQSAAFPRLSASRLALAAGAVALAALGLGGCSSMGMGGMGMGMSSAPSAVKVTNGSLTD CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC AHGMTLYTFDRDTMAGKSACNGNCANNWPPLTANDADKGSGDYTIIVRDDGKKQWAYRGK CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCC PLYLWSKDKMPGDQTGDGFMNAWHIAKP EEEEEECCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA