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The map label for this gene is apaG

Identifier: 17547597

GI number: 17547597

Start: 3106591

End: 3106965

Strand: Reverse

Name: apaG

Synonym: RSc2878

Alternate gene names: 17547597

Gene position: 3106965-3106591 (Counterclockwise)

Preceding gene: 17547608

Following gene: 17547595

Centisome position: 83.6

GC content: 66.4

Gene sequence:

>375_bases
ATGTCCCGCTACGAACTCACCGTCCAGGTCCGGACGCGCTACCTGCCTGAGCAATCCGAGCCCTCGCAGGACCAGTACGC
CTTTGCCTACACCATCACTATCCGCAATACGGGCGAGGTACCGAGCCAGCTGGTCTCGCGGCACTGGGTCATCACCGACG
CGGAGAGCCACGTGCAGGAGGTCGCCGGCCTCGGCGTGGTCGGCCACCAGCCGCTGCTGCCGCCGGGCGAATCGTTCGAG
TACACCAGCTGGGCGACCATCAAGACGCCGGTGGGCACCATGCGCGGCGAATACTTCTGCGTGGCCGAGGACGGCCATCG
CTTCGAGGCGCCGATTCCCGAGTTTGCGCTGGCGATGCCGCGCATGCTGCATTGA

Upstream 100 bases:

>100_bases
AAGGGCGCTATTTTAGCCGGATCGGCGGTCCGGCCGCCGCGCCTTGCCGGGCACTGCGGCCTTGCCGCACAATGGGCGCC
ACTTGCCACCGTGGATCGTT

Downstream 100 bases:

>100_bases
TCAGGGGGCGTCAGCCTTGGGCGGCTGTGACGCTTTCGGCGCCGTGCCGGTCGACCCGGAGCCCTCGGCGCGCGGCGCTT
CCTGGGTGCCCTCGCCCTGG

Product: ApaG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSRYELTVQVRTRYLPEQSEPSQDQYAFAYTITIRNTGEVPSQLVSRHWVITDAESHVQEVAGLGVVGHQPLLPPGESFE
YTSWATIKTPVGTMRGEYFCVAEDGHRFEAPIPEFALAMPRMLH

Sequences:

>Translated_124_residues
MSRYELTVQVRTRYLPEQSEPSQDQYAFAYTITIRNTGEVPSQLVSRHWVITDAESHVQEVAGLGVVGHQPLLPPGESFE
YTSWATIKTPVGTMRGEYFCVAEDGHRFEAPIPEFALAMPRMLH
>Mature_123_residues
SRYELTVQVRTRYLPEQSEPSQDQYAFAYTITIRNTGEVPSQLVSRHWVITDAESHVQEVAGLGVVGHQPLLPPGESFEY
TSWATIKTPVGTMRGEYFCVAEDGHRFEAPIPEFALAMPRMLH

Specific function: Unknown

COG id: COG2967

COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 apaG domain

Homologues:

Organism=Homo sapiens, GI15812188, Length=123, Percent_Identity=41.4634146341463, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI15812186, Length=123, Percent_Identity=41.4634146341463, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786235, Length=119, Percent_Identity=48.7394957983193, Blast_Score=125, Evalue=7e-31,
Organism=Drosophila melanogaster, GI21356905, Length=105, Percent_Identity=36.1904761904762, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24644238, Length=105, Percent_Identity=36.1904761904762, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): APAG_RALSO (Q8XVF3)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_520999.1
- ProteinModelPortal:   Q8XVF3
- SMR:   Q8XVF3
- GeneID:   1221731
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc2878
- NMPDR:   fig|267608.1.peg.2878
- HOGENOM:   HBG746214
- OMA:   SRHWVIT
- ProtClustDB:   PRK05461
- BioCyc:   RSOL267608:RSC2878-MONOMER
- HAMAP:   MF_00791
- InterPro:   IPR007474
- InterPro:   IPR023065
- Gene3D:   G3DSA:2.60.40.1470

Pfam domain/function: PF04379 DUF525; SSF110069 ApaG

EC number: NA

Molecular weight: Translated: 14039; Mature: 13908

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS51087 APAG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYELTVQVRTRYLPEQSEPSQDQYAFAYTITIRNTGEVPSQLVSRHWVITDAESHVQE
CCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCEEEECCHHHHHH
VAGLGVVGHQPLLPPGESFEYTSWATIKTPVGTMRGEYFCVAEDGHRFEAPIPEFALAMP
HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEECCCCCHHHHHHH
RMLH
HHCC
>Mature Secondary Structure 
SRYELTVQVRTRYLPEQSEPSQDQYAFAYTITIRNTGEVPSQLVSRHWVITDAESHVQE
CCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCEEEECCHHHHHH
VAGLGVVGHQPLLPPGESFEYTSWATIKTPVGTMRGEYFCVAEDGHRFEAPIPEFALAMP
HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEECCCCCHHHHHHH
RMLH
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852