| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is yaiE [C]
Identifier: 17547271
GI number: 17547271
Start: 2761129
End: 2761488
Strand: Direct
Name: yaiE [C]
Synonym: RSc2552
Alternate gene names: 17547271
Gene position: 2761129-2761488 (Clockwise)
Preceding gene: 17547269
Following gene: 17547272
Centisome position: 74.3
GC content: 61.11
Gene sequence:
>360_bases ATGGCCGGTTTGACCCTGACCACGCCTTTCGCGTTCCATTTCATGACCACCGAAACCATTGACGGCGTCCGCCTCACCAC CAAGGCCAATGTGTACTTTGACGGCAAGTGCGTCAGCCACAGCTTTGCGCTGCCCGACGGCACCAAAAAGTCCGTGGGCG TGGTGCTGCCCGCCACGCTGACCTTCGGCACGGCCGCCGCCGAGATCATGGAATGCGTGGGCGGTTCTTGCGAATACCGG CTCGACGGTAGCGACGAGTGGAAACAATCCGGCCCCGGCGAACGCTTCCAGGTTCCCGCAAACTCCAAGTTCGACATCCG CGTGACCGAGGCCTACCACTACATCTGCCACTACGCATAA
Upstream 100 bases:
>100_bases CGGCACCGCTGCCCCCCCGGCGCCCGCGAATTCGCACACAACGCGATCAAGAACCCCGGCCACGGCGTTCTTGTTCTTTG GGCTGGTTCTTTGGCCTAAA
Downstream 100 bases:
>100_bases GCCCCCGAAAGGCTGCCTCGAGCCCGCTCCGGGGCAGCGCAGCCATTCCGGGCTTCTTTAGCCTCTGGCGCAGGCCAGTC AAACGCCAGCCGCGATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MAGLTLTTPFAFHFMTTETIDGVRLTTKANVYFDGKCVSHSFALPDGTKKSVGVVLPATLTFGTAAAEIMECVGGSCEYR LDGSDEWKQSGPGERFQVPANSKFDIRVTEAYHYICHYA
Sequences:
>Translated_119_residues MAGLTLTTPFAFHFMTTETIDGVRLTTKANVYFDGKCVSHSFALPDGTKKSVGVVLPATLTFGTAAAEIMECVGGSCEYR LDGSDEWKQSGPGERFQVPANSKFDIRVTEAYHYICHYA >Mature_118_residues AGLTLTTPFAFHFMTTETIDGVRLTTKANVYFDGKCVSHSFALPDGTKKSVGVVLPATLTFGTAAAEIMECVGGSCEYRL DGSDEWKQSGPGERFQVPANSKFDIRVTEAYHYICHYA
Specific function: Unknown
COG id: COG3123
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0345 family [H]
Homologues:
Organism=Escherichia coli, GI1786590, Length=91, Percent_Identity=34.0659340659341, Blast_Score=61, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009664 - InterPro: IPR014710 [H]
Pfam domain/function: PF06865 DUF1255 [H]
EC number: NA
Molecular weight: Translated: 12981; Mature: 12850
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLTLTTPFAFHFMTTETIDGVRLTTKANVYFDGKCVSHSFALPDGTKKSVGVVLPATL CCCCEECCCEEEEEEECCCCCCEEEEEECCEEECCEEECCEEECCCCCCCCCEEEEECEE TFGTAAAEIMECVGGSCEYRLDGSDEWKQSGPGERFQVPANSKFDIRVTEAYHYICHYA ECCHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCEEECCCCCEEEEEECCEEEEEEECC >Mature Secondary Structure AGLTLTTPFAFHFMTTETIDGVRLTTKANVYFDGKCVSHSFALPDGTKKSVGVVLPATL CCCEECCCEEEEEEECCCCCCEEEEEECCEEECCEEECCEEECCCCCCCCCEEEEECEE TFGTAAAEIMECVGGSCEYRLDGSDEWKQSGPGERFQVPANSKFDIRVTEAYHYICHYA ECCHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCEEECCCCCEEEEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]