| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is murB
Identifier: 17547269
GI number: 17547269
Start: 2758680
End: 2759708
Strand: Direct
Name: murB
Synonym: RSc2550
Alternate gene names: 17547269
Gene position: 2758680-2759708 (Clockwise)
Preceding gene: 17547266
Following gene: 17547271
Centisome position: 74.23
GC content: 70.94
Gene sequence:
>1029_bases ATGGCGTTGCTCGACCCGCATTATCCCCTAGGCCGGCACAACACGTTCCGTTTCGAGGCCGCCGCCCGCTATGCCGCGCA CGTGCGCGCAGCGCAGGACATTGCCGAGGCACTGACCGATCCGCGCGCGCGGGGCCTGCCGGTGCTGGTGCTGGGCGGCG GCAGCAACATCGTGCTCACGCGCGACTTCGACGGCCTGGTGCTGCTGATGGAGATTCCCGGCGTGCAGGTCGGCCGGGCG ACCCTGGACGGACGCGCCGTCCACACCGTCACGGCCGGCGCGGGCGAATCGTGGCACGGCCTCGTTGCCCGCACCGTCGC CGACGGACTGCCGGGGCTGGAGAACCTGGCGCTGATCCCCGGCACCGTGGGCGCCGCGCCCATCCAGAACATCGGCGCGT ACGGCGTCGAGATCAAGGACCGCTTCCACTCCCTGCGCGCCTACGACCGCCATGCCGGCGAATTCGTCACGCTGGATGCC GCCGACTGCGCCTTCGGCTACCGCGACAGCCTCTTCAAGCGCGCCGGCGCCGACCGCTACGTCATCGCCGAAGTCACCTT CGCGCTGCCCGTGGACTGGCAGCCCGACACGCACTACGCAGAACTGGCCCGCGAGCTGGCCGCGCGGGACATCGCCGCGC CGGCGGCGCAGGACATCTTCGATGCCGTGGTCGCCATCCGCCGCCGCAAGCTGCCCGATCCGGCCGAGATCGGCAACGCG GGCAGCTTCTTCAAGAACCCCATCGTCGATACCGCCACGCGCGATGCGCTGCTGGCGCGGTTCCCCGGCCTGGTCGGCTA CGCGCAGCCGGATGGCAGCTACAAGCTCGCCGCCGGCTGGATGATCGACCAGTGCGGCTTCAAGGGCCGGCAAAGCGGCG CGGTGGGGGTGTACGACAAGCAGGCACTGGTGCTGGTGCACCGGGGCGGCGGCAGCGCCGTGCAGCTGATGACGCTGGCA CGCGAAATCCAGGACACGGTGCATGCGCGCTTCGGCGTGCGCATCGAGCCCGAGCCCGTCGTCATCTGA
Upstream 100 bases:
>100_bases TTCTCCTTGCAGACTTGAATTGGGGATCCAGCGGTGGCGCGCGCGGGCCACCCCGCGCCATGGCTCTTATAATTCCAGCT TTTCCAGCCAACCCTGCGCC
Downstream 100 bases:
>100_bases CGGCGCGACGCGCACCGCCCGGGAGTCTAGACCTCCTGCCCGCGCAGGTATTCGTTCTGGATATCGACGGTGCCGTTCCT GCCGACATCGTCGAAATGCT
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MALLDPHYPLGRHNTFRFEAAARYAAHVRAAQDIAEALTDPRARGLPVLVLGGGSNIVLTRDFDGLVLLMEIPGVQVGRA TLDGRAVHTVTAGAGESWHGLVARTVADGLPGLENLALIPGTVGAAPIQNIGAYGVEIKDRFHSLRAYDRHAGEFVTLDA ADCAFGYRDSLFKRAGADRYVIAEVTFALPVDWQPDTHYAELARELAARDIAAPAAQDIFDAVVAIRRRKLPDPAEIGNA GSFFKNPIVDTATRDALLARFPGLVGYAQPDGSYKLAAGWMIDQCGFKGRQSGAVGVYDKQALVLVHRGGGSAVQLMTLA REIQDTVHARFGVRIEPEPVVI
Sequences:
>Translated_342_residues MALLDPHYPLGRHNTFRFEAAARYAAHVRAAQDIAEALTDPRARGLPVLVLGGGSNIVLTRDFDGLVLLMEIPGVQVGRA TLDGRAVHTVTAGAGESWHGLVARTVADGLPGLENLALIPGTVGAAPIQNIGAYGVEIKDRFHSLRAYDRHAGEFVTLDA ADCAFGYRDSLFKRAGADRYVIAEVTFALPVDWQPDTHYAELARELAARDIAAPAAQDIFDAVVAIRRRKLPDPAEIGNA GSFFKNPIVDTATRDALLARFPGLVGYAQPDGSYKLAAGWMIDQCGFKGRQSGAVGVYDKQALVLVHRGGGSAVQLMTLA REIQDTVHARFGVRIEPEPVVI >Mature_341_residues ALLDPHYPLGRHNTFRFEAAARYAAHVRAAQDIAEALTDPRARGLPVLVLGGGSNIVLTRDFDGLVLLMEIPGVQVGRAT LDGRAVHTVTAGAGESWHGLVARTVADGLPGLENLALIPGTVGAAPIQNIGAYGVEIKDRFHSLRAYDRHAGEFVTLDAA DCAFGYRDSLFKRAGADRYVIAEVTFALPVDWQPDTHYAELARELAARDIAAPAAQDIFDAVVAIRRRKLPDPAEIGNAG SFFKNPIVDTATRDALLARFPGLVGYAQPDGSYKLAAGWMIDQCGFKGRQSGAVGVYDKQALVLVHRGGGSAVQLMTLAR EIQDTVHARFGVRIEPEPVVI
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
Organism=Escherichia coli, GI1790407, Length=332, Percent_Identity=43.3734939759036, Blast_Score=273, Evalue=1e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_RALSO (Q8XWC4)
Other databases:
- EMBL: AL646052 - RefSeq: NP_520671.1 - ProteinModelPortal: Q8XWC4 - SMR: Q8XWC4 - GeneID: 1221397 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2550 - NMPDR: fig|267608.1.peg.2550 - HOGENOM: HBG686573 - OMA: GAAPMQN - ProtClustDB: PRK00046 - BioCyc: RSOL267608:RSC2550-MONOMER - BRENDA: 1.1.1.158 - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 36665; Mature: 36534
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 168-168 ACT_SITE 242-242 ACT_SITE 338-338
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLDPHYPLGRHNTFRFEAAARYAAHVRAAQDIAEALTDPRARGLPVLVLGGGSNIVLT CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEE RDFDGLVLLMEIPGVQVGRATLDGRAVHTVTAGAGESWHGLVARTVADGLPGLENLALIP ECCCCEEEEEECCCCEECCEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECC GTVGAAPIQNIGAYGVEIKDRFHSLRAYDRHAGEFVTLDAADCAFGYRDSLFKRAGADRY CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHHHHHCCCCCE VIAEVTFALPVDWQPDTHYAELARELAARDIAAPAAQDIFDAVVAIRRRKLPDPAEIGNA EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCC GSFFKNPIVDTATRDALLARFPGLVGYAQPDGSYKLAAGWMIDQCGFKGRQSGAVGVYDK CCHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEECEEEHHCCCCCCCCCCEEEECC QALVLVHRGGGSAVQLMTLAREIQDTVHARFGVRIEPEPVVI CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure ALLDPHYPLGRHNTFRFEAAARYAAHVRAAQDIAEALTDPRARGLPVLVLGGGSNIVLT CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEE RDFDGLVLLMEIPGVQVGRATLDGRAVHTVTAGAGESWHGLVARTVADGLPGLENLALIP ECCCCEEEEEECCCCEECCEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECC GTVGAAPIQNIGAYGVEIKDRFHSLRAYDRHAGEFVTLDAADCAFGYRDSLFKRAGADRY CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHHHHHCCCCCE VIAEVTFALPVDWQPDTHYAELARELAARDIAAPAAQDIFDAVVAIRRRKLPDPAEIGNA EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCC GSFFKNPIVDTATRDALLARFPGLVGYAQPDGSYKLAAGWMIDQCGFKGRQSGAVGVYDK CCHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEECEEEHHCCCCCCCCCCEEEECC QALVLVHRGGGSAVQLMTLAREIQDTVHARFGVRIEPEPVVI CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852