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The map label for this gene is ybaK [H]

Identifier: 17547264

GI number: 17547264

Start: 2752969

End: 2753460

Strand: Direct

Name: ybaK [H]

Synonym: RSc2545

Alternate gene names: 17547264

Gene position: 2752969-2753460 (Clockwise)

Preceding gene: 17547263

Following gene: 17547265

Centisome position: 74.08

GC content: 67.89

Gene sequence:

>492_bases
ATGAGCAAACCCCGCCACGTTTCCGAGACGCCCGCCACGCAGTTCCTGAAGGCGCACGGCATCGCCTACACCGAACACGC
CTACGACTACGTCGACCACGGCGGCACCACCGAATCGTCGCGCCAGCTGGGCGTGGACGAGCATCACGTGATCAAGACGC
TGGTGATGGAAGACGAGCAGGCCAAGCCGCTGATCGTGCTGATGCACGGCGACTGCTCGGTCTCCACCAAAAACCTCGCG
CGCCAGGCCGGCCGCAAAAGCGTGCAGCCCTGCAAGCCGGAGGTGGCGCAGCGGCACAGCGGCTACCAGGTCGGCGGCAC
CTCGCCGTTCGGCGTGCGCAAGGCGATGCCGGTCTATGTGGAAGCCTCGGTGCTGGCGCTGGAGCGCATCTACATCAACG
GCGGCCGGCGCGGCTTCCTGGTGAGCCTGGCGCCCGCCGTGCTGACCACACTGCTCCATGCCCAGCCGGTGCAGTGCGCC
AACCCCGCCTGA

Upstream 100 bases:

>100_bases
CCACGCCGACATCTCCACCACGCAGATCTACACCCATGTCGCGCGCGAGCGGCTGCGCACCCTGCATGCACAGCACCATC
CGCGCGGATAGGCTTTCCGC

Downstream 100 bases:

>100_bases
AACGGGCGCCGCGGCTGGTGCGCGCTACAATCGCGCAGCCTGAATTCTTCGAATCCCTATGTCCACTGTCGTCGCTACCG
TCGTCTTTGCCGTGGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSKPRHVSETPATQFLKAHGIAYTEHAYDYVDHGGTTESSRQLGVDEHHVIKTLVMEDEQAKPLIVLMHGDCSVSTKNLA
RQAGRKSVQPCKPEVAQRHSGYQVGGTSPFGVRKAMPVYVEASVLALERIYINGGRRGFLVSLAPAVLTTLLHAQPVQCA
NPA

Sequences:

>Translated_163_residues
MSKPRHVSETPATQFLKAHGIAYTEHAYDYVDHGGTTESSRQLGVDEHHVIKTLVMEDEQAKPLIVLMHGDCSVSTKNLA
RQAGRKSVQPCKPEVAQRHSGYQVGGTSPFGVRKAMPVYVEASVLALERIYINGGRRGFLVSLAPAVLTTLLHAQPVQCA
NPA
>Mature_162_residues
SKPRHVSETPATQFLKAHGIAYTEHAYDYVDHGGTTESSRQLGVDEHHVIKTLVMEDEQAKPLIVLMHGDCSVSTKNLAR
QAGRKSVQPCKPEVAQRHSGYQVGGTSPFGVRKAMPVYVEASVLALERIYINGGRRGFLVSLAPAVLTTLLHAQPVQCAN
PA

Specific function: Functions in trans to edit the amino acid from incorrectly charged Cys-tRNA(Pro); has much weaker activity against Ala-tRNA(Pro). Probably compensates for the lack of Cys- tRNA(Pro) editing by ProRS. Additionally serves as a general deacylase with weak ac

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prolyl-tRNA editing family. ProX subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786688, Length=165, Percent_Identity=30.9090909090909, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 17712; Mature: 17581

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPRHVSETPATQFLKAHGIAYTEHAYDYVDHGGTTESSRQLGVDEHHVIKTLVMEDEQ
CCCCCCCCCCCHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC
AKPLIVLMHGDCSVSTKNLARQAGRKSVQPCKPEVAQRHSGYQVGGTSPFGVRKAMPVYV
CCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCEEE
EASVLALERIYINGGRRGFLVSLAPAVLTTLLHAQPVQCANPA
HHHHHHEEEEEECCCCCEEHEEHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKPRHVSETPATQFLKAHGIAYTEHAYDYVDHGGTTESSRQLGVDEHHVIKTLVMEDEQ
CCCCCCCCCCHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC
AKPLIVLMHGDCSVSTKNLARQAGRKSVQPCKPEVAQRHSGYQVGGTSPFGVRKAMPVYV
CCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCEEE
EASVLALERIYINGGRRGFLVSLAPAVLTTLLHAQPVQCANPA
HHHHHHEEEEEECCCCCEEHEEHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10813833 [H]