| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is plsY
Identifier: 17547265
GI number: 17547265
Start: 2753519
End: 2754142
Strand: Direct
Name: plsY
Synonym: RSc2546
Alternate gene names: 17547265
Gene position: 2753519-2754142 (Clockwise)
Preceding gene: 17547264
Following gene: 17547266
Centisome position: 74.09
GC content: 68.11
Gene sequence:
>624_bases ATGTCCACTGTCGTCGCTACCGTCGTCTTTGCCGTGGCCGCCTACCTGATCGGCTCGGTTTCGTTTGCCGTGGTGGTCAG CCGCGCGATGGGCCTGGCCGATCCGCGCACCTACGGCTCGGGCAACCCGGGCGCCACCAACGTGCTGCGCTCGGGCAACA AGAAGGCCGCGATCCTGACGCTGCTGGGCGACGCGGCCAAGGGCTGGCTTGCGGTGTGGCTGGCGCAACTGCTGGCGCCG CGCTACGGCGTGGAAGACATGGGCATCGCCCTGGTGGTGATCGCAGCGTTCCTCGGCCACCTGTATCCGGTGTTCCACCG CTTCACCGGCGGCAAGGGCGTGGCCACCGCGGCCGGCATCCTGCTGGCGCTGAGCGGGTGGCTGGGCCTGGCGACGCTGG CGACGTGGCTGATCATCGCCACGTTCTTCCGGTATTCGTCGCTGGCGGCGCTGGTGTCGGCGGTGTTCGCACCGTTCTAT TACGTGCTGCTGTTCGGCATCGACCCGCTGGCGGGTGCCATCGCCGTGATGTCGGTGCTGCTGATCGCGCGCCACCGCGC CAATATCGCCAAGCTGCTGGCCGGCAAGGAAAGCCGCATCGGCGAGAAGAAGAAGCCCACCTGA
Upstream 100 bases:
>100_bases CTGCTCCATGCCCAGCCGGTGCAGTGCGCCAACCCCGCCTGAAACGGGCGCCGCGGCTGGTGCGCGCTACAATCGCGCAG CCTGAATTCTTCGAATCCCT
Downstream 100 bases:
>100_bases GCGCGCGGCGCCCCGCGCGCCGATGCGCCTGCGGCGGCCGACCCGTGTGCCGCCGGGCCCATTGCAGCATGGCCCGGCAT GCCGACCTCCGGCAGATGTC
Product: glycerol-3-phosphate acyltransferase PlsY
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSTVVATVVFAVAAYLIGSVSFAVVVSRAMGLADPRTYGSGNPGATNVLRSGNKKAAILTLLGDAAKGWLAVWLAQLLAP RYGVEDMGIALVVIAAFLGHLYPVFHRFTGGKGVATAAGILLALSGWLGLATLATWLIIATFFRYSSLAALVSAVFAPFY YVLLFGIDPLAGAIAVMSVLLIARHRANIAKLLAGKESRIGEKKKPT
Sequences:
>Translated_207_residues MSTVVATVVFAVAAYLIGSVSFAVVVSRAMGLADPRTYGSGNPGATNVLRSGNKKAAILTLLGDAAKGWLAVWLAQLLAP RYGVEDMGIALVVIAAFLGHLYPVFHRFTGGKGVATAAGILLALSGWLGLATLATWLIIATFFRYSSLAALVSAVFAPFY YVLLFGIDPLAGAIAVMSVLLIARHRANIAKLLAGKESRIGEKKKPT >Mature_206_residues STVVATVVFAVAAYLIGSVSFAVVVSRAMGLADPRTYGSGNPGATNVLRSGNKKAAILTLLGDAAKGWLAVWLAQLLAPR YGVEDMGIALVVIAAFLGHLYPVFHRFTGGKGVATAAGILLALSGWLGLATLATWLIIATFFRYSSLAALVSAVFAPFYY VLLFGIDPLAGAIAVMSVLLIARHRANIAKLLAGKESRIGEKKKPT
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=194, Percent_Identity=47.4226804123711, Blast_Score=146, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_RALSO (Q8XWC8)
Other databases:
- EMBL: AL646052 - RefSeq: NP_520667.1 - GeneID: 1221393 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2546 - NMPDR: fig|267608.1.peg.2546 - HOGENOM: HBG734487 - OMA: SRIGEKK - ProtClustDB: PRK00220 - BioCyc: RSOL267608:RSC2546-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 21620; Mature: 21489
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe4cfb88)-; HASH(0xed55068)-; HASH(0xeaa57a4)-; HASH(0xebc4be0)-; HASH(0xe998680)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVVATVVFAVAAYLIGSVSFAVVVSRAMGLADPRTYGSGNPGATNVLRSGNKKAAILT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHH LLGDAAKGWLAVWLAQLLAPRYGVEDMGIALVVIAAFLGHLYPVFHRFTGGKGVATAAGI HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLALSGWLGLATLATWLIIATFFRYSSLAALVSAVFAPFYYVLLFGIDPLAGAIAVMSVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LIARHRANIAKLLAGKESRIGEKKKPT HHHHHHHHHHHHHCCCHHHCCCCCCCH >Mature Secondary Structure STVVATVVFAVAAYLIGSVSFAVVVSRAMGLADPRTYGSGNPGATNVLRSGNKKAAILT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHH LLGDAAKGWLAVWLAQLLAPRYGVEDMGIALVVIAAFLGHLYPVFHRFTGGKGVATAAGI HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLALSGWLGLATLATWLIIATFFRYSSLAALVSAVFAPFYYVLLFGIDPLAGAIAVMSVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LIARHRANIAKLLAGKESRIGEKKKPT HHHHHHHHHHHHHCCCHHHCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11823852