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The map label for this gene is tISRso14a

Identifier: 17547125

GI number: 17547125

Start: 2612570

End: 2612833

Strand: Reverse

Name: tISRso14a

Synonym: RSc2406

Alternate gene names: NA

Gene position: 2612833-2612570 (Counterclockwise)

Preceding gene: 17547127

Following gene: 17547124

Centisome position: 70.31

GC content: 61.36

Gene sequence:

>264_bases
ATGAAGAAGCGGTTTACGGAAGCGCAAATCATCGGGTTCCTGAAGGAGGCCGAGGCCGGCGTGGCGGTCAAGGAGCTGTG
CAGGAAGCACGGATTCAGTGACGCATCGTTCTACACCTGGCGGGCCAAGTTCGGCGGGATGGAGGTGTCGGAGGCCCGGC
GGCTCAAGGAGCTGGAAGCCGAGAACGCCAAGCTGAAGAAGCTGCTGGCCGAAGCGATGCTGGACATGGAAGCGCTGAAG
GTGGTGGTCAAGGGAAAGCCCTGA

Upstream 100 bases:

>100_bases
GCCTTGTCGCGGAAAGTGCTGACGGCCTGGTCTGACCTGCCCCCAATAAACCGGTCCACCGGGAAGCTAGTAGAGTCCGT
TTTCGGAGAGGAAGACGGAC

Downstream 100 bases:

>100_bases
GCCCGCAAGCCAAGCGCGAGGCGGTCGTGGCGATTCGGCGGAAGGTCAGCATCTCCGAGCGTCGCGCCTGCCGGCTTGTC
GGGCTGTCCCGCAGCGTGCT

Product: ISRSO14-transposase ORFA protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKKRFTEAQIIGFLKEAEAGVAVKELCRKHGFSDASFYTWRAKFGGMEVSEARRLKELEAENAKLKKLLAEAMLDMEALK
VVVKGKP

Sequences:

>Translated_87_residues
MKKRFTEAQIIGFLKEAEAGVAVKELCRKHGFSDASFYTWRAKFGGMEVSEARRLKELEAENAKLKKLLAEAMLDMEALK
VVVKGKP
>Mature_87_residues
MKKRFTEAQIIGFLKEAEAGVAVKELCRKHGFSDASFYTWRAKFGGMEVSEARRLKELEAENAKLKKLLAEAMLDMEALK
VVVKGKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 9804; Mature: 9804

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFTEAQIIGFLKEAEAGVAVKELCRKHGFSDASFYTWRAKFGGMEVSEARRLKELEA
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
ENAKLKKLLAEAMLDMEALKVVVKGKP
CHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKRFTEAQIIGFLKEAEAGVAVKELCRKHGFSDASFYTWRAKFGGMEVSEARRLKELEA
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
ENAKLKKLLAEAMLDMEALKVVVKGKP
CHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]