| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546931
Identifier: 17546931
GI number: 17546931
Start: 2396741
End: 2397580
Strand: Direct
Name: 17546931
Synonym: RSc2212
Alternate gene names: NA
Gene position: 2396741-2397580 (Clockwise)
Preceding gene: 17546929
Following gene: 17546938
Centisome position: 64.49
GC content: 66.67
Gene sequence:
>840_bases TTGCCAACCTGCGCCCCGGCCATGGTCACCACCCTCTACGAAACACCTGAGCATGCCTGCCTGATGTTTTCCGACCTGGT CGACGACCACGACGACCAGTCGGTCCAGACCAACCAGTTCCTCGTCGTCGACCATGGCCACGGCGCGCTGATCGACCCGG GCGGCAACATGACGTACAACGCGCTGTACCTGGCGATGAACCAATACTTCCCGCCCAAGCAGCTCGACTATGTGCTGGCC TCGCACGCGGACCCGGACATCGTCGCCTCGGCCGGGCGCTGGCTCACGAGCTCGAACTGCAACATCCTGATCTCGCGCGT GTGGGAACGCTTCCTGCCGCACTTCTGCAACGTGGGCAAGACCGACGGCCGCATCCTGCCGATCCCCGACACCGGCATGG CGATCCCGATCGGGCAGTCGCACCTGCTGGCGGTGCCGGCGCACTTCCTGCACTCGGAGGGCAACTTCCAGTTCTACGAT CCGGTGTCGCGCATCCTGTTCTCTGGCGACCTGGGCGCGTCGATGGTCCACGCGGAGATTGCCGCCGCGCCGGTGGAAGA TTTCGATGCGCACATTCCGCTGATGGCGCCGTTCCACCGCCGCTACATGAGCGGCAACCGCGTCTGCCGGCTGTGGGCCG AGATGGTGCGCGGGCTCGAGATCGAATGGATCGTGCCGCAGCATGGCCGCGCTTTCCACGGCCCGGCGATGGTCCGCCGC TTCATCGACTGGGTGGAAACGCTCACCTGCGGAATCGACCTGATGACGCAGGAGACCTTCCGCCTGCCCGCGCTGCCCAG GGTGGCGGCCGGCGCCCCGCTCAGGACGCCGCAGCCGTAG
Upstream 100 bases:
>100_bases GTGCGGGACGCTGAACCGGTGTCGGCAGGCCCTCGCAGGCACCACAGCCAAATTGACACGGATCAAGTCTCGGCATGCCG CCCTGCGCCACCATCGCGGC
Downstream 100 bases:
>100_bases CGATCGGGCCCGGCGCGGCCGGCAGGACGATCTTCATCATGGCGCTCGACAGCTCGTGCGCCAGCACATCGGGATCGATG CGCGACGGGTCGTGCCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Family Protein; Flavoprotein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Domain Protein; Two-Component Sensor Histidine Kinase; Metallo-Beta-Lactamase Superfamily Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Diguanylate Cyclase Domain Protein; Metallo-Beta-Lactamase Domain Protein; CDP-Abequose Synthase
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MPTCAPAMVTTLYETPEHACLMFSDLVDDHDDQSVQTNQFLVVDHGHGALIDPGGNMTYNALYLAMNQYFPPKQLDYVLA SHADPDIVASAGRWLTSSNCNILISRVWERFLPHFCNVGKTDGRILPIPDTGMAIPIGQSHLLAVPAHFLHSEGNFQFYD PVSRILFSGDLGASMVHAEIAAAPVEDFDAHIPLMAPFHRRYMSGNRVCRLWAEMVRGLEIEWIVPQHGRAFHGPAMVRR FIDWVETLTCGIDLMTQETFRLPALPRVAAGAPLRTPQP
Sequences:
>Translated_279_residues MPTCAPAMVTTLYETPEHACLMFSDLVDDHDDQSVQTNQFLVVDHGHGALIDPGGNMTYNALYLAMNQYFPPKQLDYVLA SHADPDIVASAGRWLTSSNCNILISRVWERFLPHFCNVGKTDGRILPIPDTGMAIPIGQSHLLAVPAHFLHSEGNFQFYD PVSRILFSGDLGASMVHAEIAAAPVEDFDAHIPLMAPFHRRYMSGNRVCRLWAEMVRGLEIEWIVPQHGRAFHGPAMVRR FIDWVETLTCGIDLMTQETFRLPALPRVAAGAPLRTPQP >Mature_278_residues PTCAPAMVTTLYETPEHACLMFSDLVDDHDDQSVQTNQFLVVDHGHGALIDPGGNMTYNALYLAMNQYFPPKQLDYVLAS HADPDIVASAGRWLTSSNCNILISRVWERFLPHFCNVGKTDGRILPIPDTGMAIPIGQSHLLAVPAHFLHSEGNFQFYDP VSRILFSGDLGASMVHAEIAAAPVEDFDAHIPLMAPFHRRYMSGNRVCRLWAEMVRGLEIEWIVPQHGRAFHGPAMVRRF IDWVETLTCGIDLMTQETFRLPALPRVAAGAPLRTPQP
Specific function: Unknown
COG id: COG0426
COG function: function code C; Uncharacterized flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31071; Mature: 30940
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTCAPAMVTTLYETPEHACLMFSDLVDDHDDQSVQTNQFLVVDHGHGALIDPGGNMTYN CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECCEEEEEECCCCEEECCCCCCCHH ALYLAMNQYFPPKQLDYVLASHADPDIVASAGRWLTSSNCNILISRVWERFLPHFCNVGK HEEEEHHCCCCHHHHHHHHHCCCCCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCC TDGRILPIPDTGMAIPIGQSHLLAVPAHFLHSEGNFQFYDPVSRILFSGDLGASMVHAEI CCCEEEECCCCCEEEECCCCHHEEHHHHHHCCCCCEEEECHHHHHHCCCCCCHHHHHHHH AAAPVEDFDAHIPLMAPFHRRYMSGNRVCRLWAEMVRGLEIEWIVPQHGRAFHGPAMVRR HHCCHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHH FIDWVETLTCGIDLMTQETFRLPALPRVAAGAPLRTPQP HHHHHHHHHHCHHHHHHHHHCCCCCCCHHCCCCCCCCCC >Mature Secondary Structure PTCAPAMVTTLYETPEHACLMFSDLVDDHDDQSVQTNQFLVVDHGHGALIDPGGNMTYN CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECCEEEEEECCCCEEECCCCCCCHH ALYLAMNQYFPPKQLDYVLASHADPDIVASAGRWLTSSNCNILISRVWERFLPHFCNVGK HEEEEHHCCCCHHHHHHHHHCCCCCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCC TDGRILPIPDTGMAIPIGQSHLLAVPAHFLHSEGNFQFYDPVSRILFSGDLGASMVHAEI CCCEEEECCCCCEEEECCCCHHEEHHHHHHCCCCCEEEECHHHHHHCCCCCCHHHHHHHH AAAPVEDFDAHIPLMAPFHRRYMSGNRVCRLWAEMVRGLEIEWIVPQHGRAFHGPAMVRR HHCCHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHH FIDWVETLTCGIDLMTQETFRLPALPRVAAGAPLRTPQP HHHHHHHHHHCHHHHHHHHHCCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA