| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546541
Identifier: 17546541
GI number: 17546541
Start: 1990746
End: 1991504
Strand: Reverse
Name: 17546541
Synonym: RSc1822
Alternate gene names: NA
Gene position: 1991504-1990746 (Counterclockwise)
Preceding gene: 17546542
Following gene: 17546540
Centisome position: 53.59
GC content: 67.59
Gene sequence:
>759_bases GTGAGTACCGCTCGCGCCTACCGCATCGGCCAGATCGTGCCGTCCTCGAACACCACCATGGAGACCGAAATTCCGGCCAT CCTGCGTGCCCGCGAATTGACGCAGCCGGAGCGCTTCACGTTCCACTCCAGCCGCATGCGCATGAAGCACGTCACCAAGG AAGAGCTGGCGGCGATGGACGCCGACAGCGACCGCTGCGCGCTCGAGCTCTCCGACGCGCGCGTCGACGTGCTGGGCTAC GCCTGCCTGGTGGCGATCATGAGCATGGGGCTCGGCTATCACCGCGTCTCGCAAGCGCGGCTGCACCAGCGCACGCAGGA GAACGGCGGCCCCGCCCCCGTGGTCACGAGCGCCGGCGCGCTGGTCGACGGCCTGAAGGCCATCGGCGCCCGCAAGGTGT CGCTGCTGGCGCCCTACATGAAGCCGCTGACGCAGCTGGTGATCGACTACATCGAGAACGAAGGCATCGAGGTCGTCGAC AGCATCTCGCTGGAGATTCCCGACAACCTGGAGGTGGGCCGGCAAGACCCGCGCGCGCCCATCGAGATCACCAAGCGGCT CAAGACCACGGGCGTCGATGCCATCGTCGCCTCGGCGTGCGTGCAGATGCCATCGCTGCCGTCGGTGCAGGCCATCGAGG ATCGCACCGGCCTGCCCGTGCTGTCTTCGTCCGTGGCCACCACCTACCTGATGCTCAAGCGGCTGGGCCTGGACACCAAG GTGCCCGGCTTCGGCTCGTTGCTGTCGGGAGCGTACTGA
Upstream 100 bases:
>100_bases GCAAGCCGCTGCGGGCCGCGCAGTTCGACGACGCCATCGACCCGGACAGCGGCGCCATCGCCGCTGAATCCGCCCCCGAC TCGAACCTGGAGAATCTCTC
Downstream 100 bases:
>100_bases CCATGGCGCGGGGGGCGGATCGTCCCGCCTCCACCGGGGAGGGGCAGGTAGAATCGCCGCTGTTTCCAGCGGATGACGAG GCAGCGAAGGGCATGACCCG
Product: maleate cis-trans isomerase
Products: fumarate
Alternate protein names: Asp/Glu/Hydantoin Racemase; Maleate Cis-Trans Isomerase; Arylmalonate Decarboxylase; Asp/Glu/Hydantoin Racemase Family Protein; Ectoine Utilization Protein EutA; Maleate Cis-Trans Isomerase Protein; Arylmalonate Decarboxylase Protein; Asp/Glu/Hydantoin Racemase Family; Asp/Glu/Hydantoin Racemase Superfamily; Racemase; Decarboxylase; Maleate Isomerase; Pyridoxal-5-Phosphate-Dependent Beta Subunit; Cis-Trans Isomerase
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSTARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMDADSDRCALELSDARVDVLGY ACLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGALVDGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVD SISLEIPDNLEVGRQDPRAPIEITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTK VPGFGSLLSGAY
Sequences:
>Translated_252_residues MSTARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMDADSDRCALELSDARVDVLGY ACLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGALVDGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVD SISLEIPDNLEVGRQDPRAPIEITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTK VPGFGSLLSGAY >Mature_251_residues STARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMDADSDRCALELSDARVDVLGYA CLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGALVDGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVDS ISLEIPDNLEVGRQDPRAPIEITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTKV PGFGSLLSGAY
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.2.1.1
Molecular weight: Translated: 27268; Mature: 27137
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMD CCCCHHEECCEEECCCCCEEHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHCC ADSDRCALELSDARVDVLGYACLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGA CCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCHH LVDGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCH IEITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTK HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC VPGFGSLLSGAY CCCHHHHHCCCC >Mature Secondary Structure STARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMD CCCHHEECCEEECCCCCEEHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHCC ADSDRCALELSDARVDVLGYACLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGA CCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCHH LVDGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCH IEITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTK HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC VPGFGSLLSGAY CCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: maleate
Specific reaction: maleate = fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA