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The map label for this gene is 17546540

Identifier: 17546540

GI number: 17546540

Start: 1990210

End: 1990653

Strand: Reverse

Name: 17546540

Synonym: RSc1821

Alternate gene names: NA

Gene position: 1990653-1990210 (Counterclockwise)

Preceding gene: 17546541

Following gene: 17546532

Centisome position: 53.56

GC content: 67.79

Gene sequence:

>444_bases
ATGACCCGAACCAAGGCGTTTGTCGACGATTACCTGCCGGCCCTCCTCGGCCGGGCCTGGCACCTGGTTTCGACCCAGTT
CCACGCGGTGGTCGAGCAGCACGGGCTGTCGGTGCTGGAGTGGCGCGTGCTGTCGACCCTGGCAAGCAACGGCCCCATGA
GCATCTCGGTGCTGGCCGAAAAGGCCGTGAGCAAGCAGCCGACCGTCACGCGGCTGCTGCTGCGCCTGGAGGCGCAAGGC
CATGTGGAGCGCTCCACCAGCCGCGACGACCGCCGCTACACCCTGGTCCGGGTCACGCGCAACGGCCGGCGCCTGGTCTC
CGGCCTGATCGCGCTGGCCGAAGAGCATGAGCGCGCGATCCTGGAGCCCATGAGCCAGCAGAAAATCGATACGCTCAAGG
ACATCCTGCACGAGCTCATCAGCCGGCACGCCCCCCAGGACTGA

Upstream 100 bases:

>100_bases
CGTACTGACCATGGCGCGGGGGGCGGATCGTCCCGCCTCCACCGGGGAGGGGCAGGTAGAATCGCCGCTGTTTCCAGCGG
ATGACGAGGCAGCGAAGGGC

Downstream 100 bases:

>100_bases
GCCCGGCCGCCTATCTCGGCCGGTACATCCTGAAGCGTCCCTGCGGCAAGACCTCGAAGTAGTCGGCGGGCCCGCCGGCG
CGCAGAATCGGCTGGGCCGC

Product: transcription regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator Protein; TRANSCRIPTIONal REGULATOR MarR Family; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTRTKAFVDDYLPALLGRAWHLVSTQFHAVVEQHGLSVLEWRVLSTLASNGPMSISVLAEKAVSKQPTVTRLLLRLEAQG
HVERSTSRDDRRYTLVRVTRNGRRLVSGLIALAEEHERAILEPMSQQKIDTLKDILHELISRHAPQD

Sequences:

>Translated_147_residues
MTRTKAFVDDYLPALLGRAWHLVSTQFHAVVEQHGLSVLEWRVLSTLASNGPMSISVLAEKAVSKQPTVTRLLLRLEAQG
HVERSTSRDDRRYTLVRVTRNGRRLVSGLIALAEEHERAILEPMSQQKIDTLKDILHELISRHAPQD
>Mature_146_residues
TRTKAFVDDYLPALLGRAWHLVSTQFHAVVEQHGLSVLEWRVLSTLASNGPMSISVLAEKAVSKQPTVTRLLLRLEAQGH
VERSTSRDDRRYTLVRVTRNGRRLVSGLIALAEEHERAILEPMSQQKIDTLKDILHELISRHAPQD

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16651; Mature: 16520

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTKAFVDDYLPALLGRAWHLVSTQFHAVVEQHGLSVLEWRVLSTLASNGPMSISVLAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH
KAVSKQPTVTRLLLRLEAQGHVERSTSRDDRRYTLVRVTRNGRRLVSGLIALAEEHERAI
HHHCCCCHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHH
LEPMSQQKIDTLKDILHELISRHAPQD
HHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRTKAFVDDYLPALLGRAWHLVSTQFHAVVEQHGLSVLEWRVLSTLASNGPMSISVLAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH
KAVSKQPTVTRLLLRLEAQGHVERSTSRDDRRYTLVRVTRNGRRLVSGLIALAEEHERAI
HHHCCCCHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHH
LEPMSQQKIDTLKDILHELISRHAPQD
HHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA