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The map label for this gene is 17546166

Identifier: 17546166

GI number: 17546166

Start: 1549845

End: 1550099

Strand: Reverse

Name: 17546166

Synonym: RSc1447

Alternate gene names: NA

Gene position: 1550099-1549845 (Counterclockwise)

Preceding gene: 17546167

Following gene: 17546165

Centisome position: 41.71

GC content: 69.8

Gene sequence:

>255_bases
GTGATATCCATGGAGTCGCTGCTCTCCTCGGCGCCGCAGCTGTCGGCGCATCTGAAATCGTTGCGCAAGGCGCGCGGACT
CACGCAGGCCCAGTTGGGCGCACTGCTGGGCGTCAGCCAGAACCGCATCGCCGACATCGAAAAAGACCCGGGCGCGGTCG
GCTTCGAGCAGTTGCTGCGCATCCTGCACGCGCTCGGCGCGCAGCTGACGCTGCGCACGTCCGCGCCCGCCGCCGCCGCG
CCCGCCGACTGGTAA

Upstream 100 bases:

>100_bases
GCCTGAATCGCACCCCGGAACGGTACGACGCATTGATCGCCCAACGGCGATATCTTGCATTTATCGCCCCAAAGCGATAA
ATTACAAATATCGTCTTGGG

Downstream 100 bases:

>100_bases
GCCATGGCGCATCCCGAACTGCATCTGTGGATGAACGGCGAGCATGTCGGCATCTGGACCGCCAGCCGCGCCGGCGTGCC
GATCCTGCGCTATGACGACG

Product: transcription regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator Protein

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MISMESLLSSAPQLSAHLKSLRKARGLTQAQLGALLGVSQNRIADIEKDPGAVGFEQLLRILHALGAQLTLRTSAPAAAA
PADW

Sequences:

>Translated_84_residues
MISMESLLSSAPQLSAHLKSLRKARGLTQAQLGALLGVSQNRIADIEKDPGAVGFEQLLRILHALGAQLTLRTSAPAAAA
PADW
>Mature_84_residues
MISMESLLSSAPQLSAHLKSLRKARGLTQAQLGALLGVSQNRIADIEKDPGAVGFEQLLRILHALGAQLTLRTSAPAAAA
PADW

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8814; Mature: 8814

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISMESLLSSAPQLSAHLKSLRKARGLTQAQLGALLGVSQNRIADIEKDPGAVGFEQLLR
CCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
ILHALGAQLTLRTSAPAAAAPADW
HHHHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MISMESLLSSAPQLSAHLKSLRKARGLTQAQLGALLGVSQNRIADIEKDPGAVGFEQLLR
CCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
ILHALGAQLTLRTSAPAAAAPADW
HHHHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA