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The map label for this gene is yajR [C]

Identifier: 17546164

GI number: 17546164

Start: 1547305

End: 1548507

Strand: Reverse

Name: yajR [C]

Synonym: RSc1445

Alternate gene names: 17546164

Gene position: 1548507-1547305 (Counterclockwise)

Preceding gene: 17546165

Following gene: 17546163

Centisome position: 41.67

GC content: 72.82

Gene sequence:

>1203_bases
ATGACCGCAAACCCGCGCCCCGACGTCCTGCGCCGCCTGCCGCCCGGCATCTGGGTTCTGGGTGGCGTCAGCCTGCTGAT
GGACGTCGCCTCCGAGATGATCCACAGCCTGCTGCCGATGTTCATGGTCTCGGCGCTGGGCGCGAGCGCGCTTACGGTCG
GCCTCGTCGAAGGGCTGGCCGAATCGACGGCACTGATCGTCAAGATCTTCTCCGGCGCGCTCAGCGACTACCTCGGCAGA
CGCAAGGGACTGGCGGTGTTCGGCTACGCGCTGGGCGCCGTGTCCAAGCCGCTGTTCGCGTTGGCGCCCACCGCGGGGCT
CGTGCTGGCGGCGCGGCTGCTGGACCGCGTCGGCAAGGGCGTGCGCGGCGCACCGCGCGATGCGCTAGTCGCCGACATCG
CCCCGCCGGAACTGCGCGGCGCGGCCTTCGGGCTACGGCAATCGCTCGACACCGTGGGCGCGTTCCTCGGGCCGCTGCTG
GCGGTCGGGCTCATGCTGCGGTGGGCGAACGATTTCCGCGCGGTGTTCTGGGTGGCCGTGGTGCCGGGCCTGCTCTCGGT
GGCGCTGCTGGCCTTCGGCCTGCGCGAACCGGCGGCCCGCGCGGCCACGCACCGCGCCAACCCGATCCGCCGCGCCAACC
TGCGGCGGCTCACCCGCGCCTACTGGTGGGTCGTCGCCATCGGTGCCGTCTTCACGCTCGCCCGCTTCAGCGAAGCGTTT
CTCGTGCTGCGCGCCCAGCGGGGCGGCGTGCCGATCGCGCTGGTGCCGCTGGTGATGGTGGCGATGAACGTGGTCTATGC
GCTGTCCGCCTATCCGTTCGGCAAGCTGTCGGACCGCGTCAGCCATACCGGTCTGCTGGCGCTGGGCCTCGTCGTGCTGA
TCGCCGCGGACCTCGTGCTCGGCGCTACCGACCACTGGGGCGCCGTGCTGGCGGGCGTCGCGCTGTGGGGCGTCCATATG
GGCATCACGCAGGGGCTGCTGGCCACCATGGTGGCCGACACCGCCCCCGCCGACCTGCGCGGCACCGCCTACGGCGCCTT
CAACCTGGTCAGCGGCATCGCCATGCTGGTGGCCAGCGCCCTGGCCGGCTGGCTGTGGGATGCCCACGGCGCCGCCGCCA
CCTTCCACGCCGGCGCCGTGTTCTGCGGACTGGCACTGGCCCTGCTCGCCATCGGCCGCCCGTGGCAGGCGGCGTCGCGC
TGA

Upstream 100 bases:

>100_bases
TCCTGCCGCCCGACTTCTCGGGCCGGGTCTGGAGCAGCGTGCGCACCGGCGTGCTCGCGCAGGCCGAGCGCTTTCTCAAC
GAACTGGCGTCCGTCACCCC

Downstream 100 bases:

>100_bases
CCGCCCAGGCGGCGCTCGGCAGCCGCTGAAACCACGCCGCCAGACAATCCAGCGCGCTCGGCCAGCCGGCACCTTGCAGT
ACACTGCCGCCGCACCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MTANPRPDVLRRLPPGIWVLGGVSLLMDVASEMIHSLLPMFMVSALGASALTVGLVEGLAESTALIVKIFSGALSDYLGR
RKGLAVFGYALGAVSKPLFALAPTAGLVLAARLLDRVGKGVRGAPRDALVADIAPPELRGAAFGLRQSLDTVGAFLGPLL
AVGLMLRWANDFRAVFWVAVVPGLLSVALLAFGLREPAARAATHRANPIRRANLRRLTRAYWWVVAIGAVFTLARFSEAF
LVLRAQRGGVPIALVPLVMVAMNVVYALSAYPFGKLSDRVSHTGLLALGLVVLIAADLVLGATDHWGAVLAGVALWGVHM
GITQGLLATMVADTAPADLRGTAYGAFNLVSGIAMLVASALAGWLWDAHGAAATFHAGAVFCGLALALLAIGRPWQAASR

Sequences:

>Translated_400_residues
MTANPRPDVLRRLPPGIWVLGGVSLLMDVASEMIHSLLPMFMVSALGASALTVGLVEGLAESTALIVKIFSGALSDYLGR
RKGLAVFGYALGAVSKPLFALAPTAGLVLAARLLDRVGKGVRGAPRDALVADIAPPELRGAAFGLRQSLDTVGAFLGPLL
AVGLMLRWANDFRAVFWVAVVPGLLSVALLAFGLREPAARAATHRANPIRRANLRRLTRAYWWVVAIGAVFTLARFSEAF
LVLRAQRGGVPIALVPLVMVAMNVVYALSAYPFGKLSDRVSHTGLLALGLVVLIAADLVLGATDHWGAVLAGVALWGVHM
GITQGLLATMVADTAPADLRGTAYGAFNLVSGIAMLVASALAGWLWDAHGAAATFHAGAVFCGLALALLAIGRPWQAASR
>Mature_399_residues
TANPRPDVLRRLPPGIWVLGGVSLLMDVASEMIHSLLPMFMVSALGASALTVGLVEGLAESTALIVKIFSGALSDYLGRR
KGLAVFGYALGAVSKPLFALAPTAGLVLAARLLDRVGKGVRGAPRDALVADIAPPELRGAAFGLRQSLDTVGAFLGPLLA
VGLMLRWANDFRAVFWVAVVPGLLSVALLAFGLREPAARAATHRANPIRRANLRRLTRAYWWVVAIGAVFTLARFSEAFL
VLRAQRGGVPIALVPLVMVAMNVVYALSAYPFGKLSDRVSHTGLLALGLVVLIAADLVLGATDHWGAVLAGVALWGVHMG
ITQGLLATMVADTAPADLRGTAYGAFNLVSGIAMLVASALAGWLWDAHGAAATFHAGAVFCGLALALLAIGRPWQAASR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=387, Percent_Identity=24.2894056847545, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41709; Mature: 41578

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANPRPDVLRRLPPGIWVLGGVSLLMDVASEMIHSLLPMFMVSALGASALTVGLVEGLA
CCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESTALIVKIFSGALSDYLGRRKGLAVFGYALGAVSKPLFALAPTAGLVLAARLLDRVGKG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCC
VRGAPRDALVADIAPPELRGAAFGLRQSLDTVGAFLGPLLAVGLMLRWANDFRAVFWVAV
CCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPGLLSVALLAFGLREPAARAATHRANPIRRANLRRLTRAYWWVVAIGAVFTLARFSEAF
HHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLRAQRGGVPIALVPLVMVAMNVVYALSAYPFGKLSDRVSHTGLLALGLVVLIAADLVL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GATDHWGAVLAGVALWGVHMGITQGLLATMVADTAPADLRGTAYGAFNLVSGIAMLVASA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LAGWLWDAHGAAATFHAGAVFCGLALALLAIGRPWQAASR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TANPRPDVLRRLPPGIWVLGGVSLLMDVASEMIHSLLPMFMVSALGASALTVGLVEGLA
CCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESTALIVKIFSGALSDYLGRRKGLAVFGYALGAVSKPLFALAPTAGLVLAARLLDRVGKG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCC
VRGAPRDALVADIAPPELRGAAFGLRQSLDTVGAFLGPLLAVGLMLRWANDFRAVFWVAV
CCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPGLLSVALLAFGLREPAARAATHRANPIRRANLRRLTRAYWWVVAIGAVFTLARFSEAF
HHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLRAQRGGVPIALVPLVMVAMNVVYALSAYPFGKLSDRVSHTGLLALGLVVLIAADLVL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GATDHWGAVLAGVALWGVHMGITQGLLATMVADTAPADLRGTAYGAFNLVSGIAMLVASA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LAGWLWDAHGAAATFHAGAVFCGLALALLAIGRPWQAASR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]