| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546163
Identifier: 17546163
GI number: 17546163
Start: 1546351
End: 1547079
Strand: Reverse
Name: 17546163
Synonym: RSc1444
Alternate gene names: NA
Gene position: 1547079-1546351 (Counterclockwise)
Preceding gene: 17546164
Following gene: 17546159
Centisome position: 41.63
GC content: 72.84
Gene sequence:
>729_bases ATGGCAACCTTGCACTACATCTTCGACCCGCTGTGCGGCTGGTGCTACGGCGCCGCGCCGCTGGTGGAAGCGGCCCGCAC GGTACCGGGCCTCGCCGTCGCCTTCCACGGCGGCGGCATGTTGGCCGGCCCCAACCGCCGCGCGGTGACGCCGCAATGGC GCAGCTACGTGATGCCGCACGACCACCGCATCGCCGAGCTGACCGGCCAGCCCTTCGGCACGCCCTACTTCGAGGGCCTG CTGCGCGACACCACAGCCGTGATGGACTCCGAACCGCCGATCACCGCGGCGCTGGCGGCACAGGCCATCGGCGGACGCGG CCTCGACATGATCCACAGGGTGCAGCGCGCGCACTATGAAGAAGGCCGGCGCATCGCCGATGCGCCGGTCCTGCGCGAAC TGGCCGTCGACCTCGGCCTGCCCGCCGACGTGTTCGATGCCGAATGCGCACGGCAGTCCGGTGCGCTCACGCAGCAGCAC ATCGCCGCCAGCCGGCGCCTGCTCGATCGCGTGGGCGGCCAGGGTTACCCCACCTTCGTGCTGGAAGACGGCGAGGGCCG GATGGACGTGGTGGATGCCGGCGCATGGCTGGGCCGTCCCGAGGCCTGGGCGCAGGCGCTGGCACAGCATCTCGCGGCCG GCACCGCAACGCCCGCGGCAGCCGGCGTGCATGAAGCCGCGCCGGCCTGCGGCCCCGACAGCTGCGCACTGCCCGGCACA TCCGCCTGA
Upstream 100 bases:
>100_bases ACGAACATCGCGCCCATGACAGCTTGAGCAGACGCGGCATCGCCCCAAACTGCAACGCGCGGCACCCGACGGGCACCCTG CACAATCCTGGAGACGCCAG
Downstream 100 bases:
>100_bases CACGGCCGAATCCGGCCGACGCTCAGGACGATAGGCCGCCCTCCCGCAGCGGCCATCGTCCCTTCTCGTCATAGCGCGTC CTGCCGAGCCAGCTGTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: DSBA Oxidoreductase; Thioredoxin Domain-Containing Protein; Thioredoxin; Thioredoxin Domain Protein DsbA Family; DSBA-Like Thioredoxin Domain-Containing Protein; Protein-Disulfide Isomerase-Like Protein; Thioredoxin Domain-Containing Protein DsbA Family; Thioredoxin-Like Fold
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MATLHYIFDPLCGWCYGAAPLVEAARTVPGLAVAFHGGGMLAGPNRRAVTPQWRSYVMPHDHRIAELTGQPFGTPYFEGL LRDTTAVMDSEPPITAALAAQAIGGRGLDMIHRVQRAHYEEGRRIADAPVLRELAVDLGLPADVFDAECARQSGALTQQH IAASRRLLDRVGGQGYPTFVLEDGEGRMDVVDAGAWLGRPEAWAQALAQHLAAGTATPAAAGVHEAAPACGPDSCALPGT SA
Sequences:
>Translated_242_residues MATLHYIFDPLCGWCYGAAPLVEAARTVPGLAVAFHGGGMLAGPNRRAVTPQWRSYVMPHDHRIAELTGQPFGTPYFEGL LRDTTAVMDSEPPITAALAAQAIGGRGLDMIHRVQRAHYEEGRRIADAPVLRELAVDLGLPADVFDAECARQSGALTQQH IAASRRLLDRVGGQGYPTFVLEDGEGRMDVVDAGAWLGRPEAWAQALAQHLAAGTATPAAAGVHEAAPACGPDSCALPGT SA >Mature_241_residues ATLHYIFDPLCGWCYGAAPLVEAARTVPGLAVAFHGGGMLAGPNRRAVTPQWRSYVMPHDHRIAELTGQPFGTPYFEGLL RDTTAVMDSEPPITAALAAQAIGGRGLDMIHRVQRAHYEEGRRIADAPVLRELAVDLGLPADVFDAECARQSGALTQQHI AASRRLLDRVGGQGYPTFVLEDGEGRMDVVDAGAWLGRPEAWAQALAQHLAAGTATPAAAGVHEAAPACGPDSCALPGTS A
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25480; Mature: 25349
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLHYIFDPLCGWCYGAAPLVEAARTVPGLAVAFHGGGMLAGPNRRAVTPQWRSYVMPH CCCHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCHHHHHHCCCC DHRIAELTGQPFGTPYFEGLLRDTTAVMDSEPPITAALAAQAIGGRGLDMIHRVQRAHYE CCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH EGRRIADAPVLRELAVDLGLPADVFDAECARQSGALTQQHIAASRRLLDRVGGQGYPTFV HCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEE LEDGEGRMDVVDAGAWLGRPEAWAQALAQHLAAGTATPAAAGVHEAAPACGPDSCALPGT EECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHCHHHHCCCCCCCCCCCCCC SA CC >Mature Secondary Structure ATLHYIFDPLCGWCYGAAPLVEAARTVPGLAVAFHGGGMLAGPNRRAVTPQWRSYVMPH CCHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCHHHHHHCCCC DHRIAELTGQPFGTPYFEGLLRDTTAVMDSEPPITAALAAQAIGGRGLDMIHRVQRAHYE CCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH EGRRIADAPVLRELAVDLGLPADVFDAECARQSGALTQQHIAASRRLLDRVGGQGYPTFV HCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEE LEDGEGRMDVVDAGAWLGRPEAWAQALAQHLAAGTATPAAAGVHEAAPACGPDSCALPGT EECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHCHHHHCCCCCCCCCCCCCC SA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA