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The map label for this gene is 17546042

Identifier: 17546042

GI number: 17546042

Start: 1408332

End: 1408703

Strand: Reverse

Name: 17546042

Synonym: RSc1323

Alternate gene names: NA

Gene position: 1408703-1408332 (Counterclockwise)

Preceding gene: 17546043

Following gene: 17546041

Centisome position: 37.9

GC content: 60.75

Gene sequence:

>372_bases
ATGAATCTCGTCACTTTCGGGCTGATCTTGACGGGCGTGATGCTCAACGCCTGCGCCCAATTGCTGCTGAAGGCGGGCGT
CAACGCCATCGGACGCTTCGCCTTCTCGGTGGAAAACATCGTGCCGATCGGCATCAAGCTTGCGACCCAGCTGCCCATCA
TCGGCGGGCTGGCCTGCTACGTGATTTCCGTGGTGGTCTGGATTCTCGGTCTGTCGCGCGTGGATGTGACCATTGCGTAT
CCGATGCTGTCGCTGGGCTACGTGGTCAACGCGATCCTGGCGTGGTATCTCTTCGGAGAGGTGCTGTCGCTCCAGCGGCT
GATCGGCATCACCATCATCCTGATCGGCGTGTTCGTGCTGGCGCGCTCCTGA

Upstream 100 bases:

>100_bases
GCGTGCTGAAAGGGGCACGCAAGCGGATTTGTCGTAACATGCCGCCCGCGGCGCCGGGGGAAACACTGCTGCGGTCGGTA
AAATCACAACAACACAACAC

Downstream 100 bases:

>100_bases
CCTGCCCAACTCTCCTGATCGACATCCCATGACCCAAACCAACGCCGTCGCCGAACAACCGTTCCTGCCCTTCGTGCGCC
CCACCATCGACGAGGCGACC

Product: small multidrug resistance transmembrane protein

Products: NA

Alternate protein names: Small Multidrug Resistance Transmembrane Protein; Multidrug Resistance Protein SMR Family; QuateRNAry Ammonium Compound-Resistance Protein; Transporter DME Family

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNLVTFGLILTGVMLNACAQLLLKAGVNAIGRFAFSVENIVPIGIKLATQLPIIGGLACYVISVVVWILGLSRVDVTIAY
PMLSLGYVVNAILAWYLFGEVLSLQRLIGITIILIGVFVLARS

Sequences:

>Translated_123_residues
MNLVTFGLILTGVMLNACAQLLLKAGVNAIGRFAFSVENIVPIGIKLATQLPIIGGLACYVISVVVWILGLSRVDVTIAY
PMLSLGYVVNAILAWYLFGEVLSLQRLIGITIILIGVFVLARS
>Mature_123_residues
MNLVTFGLILTGVMLNACAQLLLKAGVNAIGRFAFSVENIVPIGIKLATQLPIIGGLACYVISVVVWILGLSRVDVTIAY
PMLSLGYVVNAILAWYLFGEVLSLQRLIGITIILIGVFVLARS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13147; Mature: 13147

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVTFGLILTGVMLNACAQLLLKAGVNAIGRFAFSVENIVPIGIKLATQLPIIGGLACY
CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHH
VISVVVWILGLSRVDVTIAYPMLSLGYVVNAILAWYLFGEVLSLQRLIGITIILIGVFVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARS
HCC
>Mature Secondary Structure
MNLVTFGLILTGVMLNACAQLLLKAGVNAIGRFAFSVENIVPIGIKLATQLPIIGGLACY
CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHH
VISVVVWILGLSRVDVTIAYPMLSLGYVVNAILAWYLFGEVLSLQRLIGITIILIGVFVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA