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The map label for this gene is yfbE [C]

Identifier: 17546041

GI number: 17546041

Start: 1407143

End: 1408303

Strand: Reverse

Name: yfbE [C]

Synonym: RSc1322

Alternate gene names: 17546041

Gene position: 1408303-1407143 (Counterclockwise)

Preceding gene: 17546042

Following gene: 17546040

Centisome position: 37.89

GC content: 68.04

Gene sequence:

>1161_bases
ATGACCCAAACCAACGCCGTCGCCGAACAACCGTTCCTGCCCTTCGTGCGCCCCACCATCGACGAGGCGACCATCGCCGC
CGTGGCCGATGTGCTGCGCTCGGGCTGGATCACCTCGGGCCCCAAGGTCGCCGCGTTCGAAGCCGCGCTGTCGGAATACT
TCGGCGGCCGCCCGGTGCGCACCTTCGCCAACGGCACCGCCACGATGGAAGTGGCGCTGCGCGTCGCGGGCATCGGCCCC
GGCGACGAGGTCATCACCACGCCCATCTCGTGGGTGGCCACCTCCAACGTGGTGCTGACGGTCGGCGCCAGGCCCGTCTT
CGTCGACATCGACCCAGTCACCCGCAACATCGACCTGGACAAGATCGAGGCCGCCATCACGCCGCGCACGCGCGCGATCA
TCCCGGTCTACCTGTCGGGCCTGCCGGTGGACATGGACCGCCTGTACGACATCGCCCGCCGCCACAAGCTGCGCGTGGTG
GAAGACGCCGCGCAGGCCATCGGCTCGCGCTGGGGCGACCAGCGCATCGGCCAGCTCGGCGACCTGGTCAGCTTCAGCTT
CCAGGCCAACAAGAACATCACCACCATCGAGGGCGGCGCGCTCGTGCTGAACACGCCCGAAGAAGCCGTGCTGGCCGAGA
AATACCGCCTGCAGGGCGTGGTCCGCACCGGCTTCGACGGCATGGAAGTCGACGTGGTGGGCGGCAAGTTCAACCTGACC
GACGTCAACGCCGCCATCGGCCTCGGCCAGTTCGCCCAGCTGGAGGCCATCACCGCGCGCCGCGCCGCGCTGGCCCGCCG
CTACTTCGCCGCCATGCGCGCGGCCAACATCGAATCGTTCGGCATCGAGCTGCCGGTCGAAGATTTCGCGCACACCAACT
GGCACATGTTCCAGATCGTGCTGCCGCTCGATCGCCTCAAGGTCGATCGCGCCGGCTTCATGGCCGGGCTGAAGGCCATG
GGCATCGGCACCGGCGTGCACTATCCGCCCATCCACCTGTTCAAGCTGTACCGCGAGCTCGGCTGGGGCCCGGGCATGTT
CCCGGTGGCCGAGCGCATCGGGCGCGCCATCGTGACGCTGCCGATGTTCGCCGCCATGGAAGATTCCGACGTGGACCGCG
TAGTCAATGCGGTCCGCCAACTCTGCATCCAACACCAATAA

Upstream 100 bases:

>100_bases
GTGCTGTCGCTCCAGCGGCTGATCGGCATCACCATCATCCTGATCGGCGTGTTCGTGCTGGCGCGCTCCTGACCTGCCCA
ACTCTCCTGATCGACATCCC

Downstream 100 bases:

>100_bases
TGAAGACACCCGCTCTCTCGGTCGTCATTCCCGTCTACAACGAGGAAGAGGGGCTCGCCGCCCTGTTCGCGCGCCTGTAT
CCCGCCCTCGATGCACTCGG

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTQTNAVAEQPFLPFVRPTIDEATIAAVADVLRSGWITSGPKVAAFEAALSEYFGGRPVRTFANGTATMEVALRVAGIGP
GDEVITTPISWVATSNVVLTVGARPVFVDIDPVTRNIDLDKIEAAITPRTRAIIPVYLSGLPVDMDRLYDIARRHKLRVV
EDAAQAIGSRWGDQRIGQLGDLVSFSFQANKNITTIEGGALVLNTPEEAVLAEKYRLQGVVRTGFDGMEVDVVGGKFNLT
DVNAAIGLGQFAQLEAITARRAALARRYFAAMRAANIESFGIELPVEDFAHTNWHMFQIVLPLDRLKVDRAGFMAGLKAM
GIGTGVHYPPIHLFKLYRELGWGPGMFPVAERIGRAIVTLPMFAAMEDSDVDRVVNAVRQLCIQHQ

Sequences:

>Translated_386_residues
MTQTNAVAEQPFLPFVRPTIDEATIAAVADVLRSGWITSGPKVAAFEAALSEYFGGRPVRTFANGTATMEVALRVAGIGP
GDEVITTPISWVATSNVVLTVGARPVFVDIDPVTRNIDLDKIEAAITPRTRAIIPVYLSGLPVDMDRLYDIARRHKLRVV
EDAAQAIGSRWGDQRIGQLGDLVSFSFQANKNITTIEGGALVLNTPEEAVLAEKYRLQGVVRTGFDGMEVDVVGGKFNLT
DVNAAIGLGQFAQLEAITARRAALARRYFAAMRAANIESFGIELPVEDFAHTNWHMFQIVLPLDRLKVDRAGFMAGLKAM
GIGTGVHYPPIHLFKLYRELGWGPGMFPVAERIGRAIVTLPMFAAMEDSDVDRVVNAVRQLCIQHQ
>Mature_385_residues
TQTNAVAEQPFLPFVRPTIDEATIAAVADVLRSGWITSGPKVAAFEAALSEYFGGRPVRTFANGTATMEVALRVAGIGPG
DEVITTPISWVATSNVVLTVGARPVFVDIDPVTRNIDLDKIEAAITPRTRAIIPVYLSGLPVDMDRLYDIARRHKLRVVE
DAAQAIGSRWGDQRIGQLGDLVSFSFQANKNITTIEGGALVLNTPEEAVLAEKYRLQGVVRTGFDGMEVDVVGGKFNLTD
VNAAIGLGQFAQLEAITARRAALARRYFAAMRAANIESFGIELPVEDFAHTNWHMFQIVLPLDRLKVDRAGFMAGLKAMG
IGTGVHYPPIHLFKLYRELGWGPGMFPVAERIGRAIVTLPMFAAMEDSDVDRVVNAVRQLCIQHQ

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=382, Percent_Identity=39.5287958115183, Blast_Score=245, Evalue=4e-66,
Organism=Escherichia coli, GI2367285, Length=359, Percent_Identity=33.1476323119777, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42027; Mature: 41896

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTNAVAEQPFLPFVRPTIDEATIAAVADVLRSGWITSGPKVAAFEAALSEYFGGRPVR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEE
TFANGTATMEVALRVAGIGPGDEVITTPISWVATSNVVLTVGARPVFVDIDPVTRNIDLD
HHCCCCEEEEEEEEEECCCCCCCEEECCHHHEEECCEEEEECCCEEEEECCCCCCCCCHH
KIEAAITPRTRAIIPVYLSGLPVDMDRLYDIARRHKLRVVEDAAQAIGSRWGDQRIGQLG
HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DLVSFSFQANKNITTIEGGALVLNTPEEAVLAEKYRLQGVVRTGFDGMEVDVVGGKFNLT
HHHEEEEECCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEE
DVNAAIGLGQFAQLEAITARRAALARRYFAAMRAANIESFGIELPVEDFAHTNWHMFQIV
ECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCEEEEEEE
LPLDRLKVDRAGFMAGLKAMGIGTGVHYPPIHLFKLYRELGWGPGMFPVAERIGRAIVTL
ECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHH
PMFAAMEDSDVDRVVNAVRQLCIQHQ
HHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTNAVAEQPFLPFVRPTIDEATIAAVADVLRSGWITSGPKVAAFEAALSEYFGGRPVR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEE
TFANGTATMEVALRVAGIGPGDEVITTPISWVATSNVVLTVGARPVFVDIDPVTRNIDLD
HHCCCCEEEEEEEEEECCCCCCCEEECCHHHEEECCEEEEECCCEEEEECCCCCCCCCHH
KIEAAITPRTRAIIPVYLSGLPVDMDRLYDIARRHKLRVVEDAAQAIGSRWGDQRIGQLG
HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DLVSFSFQANKNITTIEGGALVLNTPEEAVLAEKYRLQGVVRTGFDGMEVDVVGGKFNLT
HHHEEEEECCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEE
DVNAAIGLGQFAQLEAITARRAALARRYFAAMRAANIESFGIELPVEDFAHTNWHMFQIV
ECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCEEEEEEE
LPLDRLKVDRAGFMAGLKAMGIGTGVHYPPIHLFKLYRELGWGPGMFPVAERIGRAIVTL
ECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHH
PMFAAMEDSDVDRVVNAVRQLCIQHQ
HHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]