| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is aroG2 [H]
Identifier: 17545462
GI number: 17545462
Start: 788720
End: 789898
Strand: Direct
Name: aroG2 [H]
Synonym: RSc0743
Alternate gene names: 17545462
Gene position: 788720-789898 (Clockwise)
Preceding gene: 161621734
Following gene: 17545464
Centisome position: 21.22
GC content: 66.33
Gene sequence:
>1179_bases ATGGGCAATCGGCGGACTGCCCCGGTTTCGGCGCACCGCTCGTGTTTCCAGGAGTTTTCCGTGATTCGCATCGACAATCC CCAAAGCGACCAAGAAGTCGGCGTGGCCGACGCTACCCAGGACACCACCCGCATCGATGACGTGCGCATCGGTGCGGTCC GTCCGCTCATTTCCCCGGCACTCCTGCTCGACGAGTTGCCCGTGTCGCCCGCCGTGCAGGCGCACGTCGAAGCGAGCCGG GCCGCGGTCACGGACATCCTGCACGGACGGGACGATCGCCTGCTTGCCGTGGTGGGCCCGTGCTCGATCCACGATCACGA CCAGGCGCTCGACTACGCCCATCGGCTCGGGACGGCCGCGAATCGCCTGCGCGACGATCTGCTGATCGTCATGCGCGTGT ATTTCGAAAAGCCGCGCACGACCGTCGGCTGGAAGGGCTACATCAACGATCCGCGGCTCGACGGCAGCTTCCGCATCAAC GAAGGGCTGCGCCGTGCGCGCCAGTTGCTCCTGGAAGTCAACGCGATGGGATTGCCGGCGGCCACCGAGTTTCTCGATCT GCTGAGTCCGCAGTACATCGCGGACCTGATTGCCTGGGGCGCGATCGGCGCCAGGACGACGGAAAGCCAGAGCCATCGGC AGCTCGCCTCGGGACTGAGCTGTCCCATCGGCTTCAAGAACGGCACGGATGGCGGTGTCCAGATCGCGGCGGACGCGATT CTGGCGGCGCGGTCGAGCCACTCGTTCATGGGCATGACGAAGATGGGGATGGCCGCGATTTTCGAGACGCGCGGCAACGG TGATGCGCACGTCATTCTTCGCGGCGGCAAGAAGGGACCGAACTATGACGCGGCGGCCATCGAAGACAGCTGCGCGATTC TCCGGGCGGCCGGGCTGCGCGAGCAGGTGATGGTCGACTGTTCGCACGCGAACTCGGGCAAGTCCCATGCCCGTCAAGCC GACGTTGCGCGGGATCTGGCGCAGCAGCTGTCGTCCGGCGAGCGGCGCATCAGCGGCGTGATGATCGAGAGCCATCTGGA AGAGGGGCGCCAGGATCTGAAACCCGGCGTGCCGTTGCAGCGCGGCGTGTCCATTACCGATGCCTGCCTTGGGTGGTCCC AGACGGAACCGTTGCTGGAAACCCTCGCAACGGCTGTGCGTGCGCGGCGGCGCGGCTAG
Upstream 100 bases:
>100_bases AAGTCCGCCTTCAGTCTGCGCATCCGAAACCCGAGCTCGACTCACTACAATACCCGCCTGCGCTGCCATCCGCCGCTCGC CCCGCCGATTTCCGCCGTCA
Downstream 100 bases:
>100_bases CGGGGACTCGCGTCGAGGGGGATCACCATGCTGGTTTGGCGCCTAGCATGTGTCGCTGGCGATGAGATGTCCGGCGATCT GAAGTGCGCCGATTGGCATC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MGNRRTAPVSAHRSCFQEFSVIRIDNPQSDQEVGVADATQDTTRIDDVRIGAVRPLISPALLLDELPVSPAVQAHVEASR AAVTDILHGRDDRLLAVVGPCSIHDHDQALDYAHRLGTAANRLRDDLLIVMRVYFEKPRTTVGWKGYINDPRLDGSFRIN EGLRRARQLLLEVNAMGLPAATEFLDLLSPQYIADLIAWGAIGARTTESQSHRQLASGLSCPIGFKNGTDGGVQIAADAI LAARSSHSFMGMTKMGMAAIFETRGNGDAHVILRGGKKGPNYDAAAIEDSCAILRAAGLREQVMVDCSHANSGKSHARQA DVARDLAQQLSSGERRISGVMIESHLEEGRQDLKPGVPLQRGVSITDACLGWSQTEPLLETLATAVRARRRG
Sequences:
>Translated_392_residues MGNRRTAPVSAHRSCFQEFSVIRIDNPQSDQEVGVADATQDTTRIDDVRIGAVRPLISPALLLDELPVSPAVQAHVEASR AAVTDILHGRDDRLLAVVGPCSIHDHDQALDYAHRLGTAANRLRDDLLIVMRVYFEKPRTTVGWKGYINDPRLDGSFRIN EGLRRARQLLLEVNAMGLPAATEFLDLLSPQYIADLIAWGAIGARTTESQSHRQLASGLSCPIGFKNGTDGGVQIAADAI LAARSSHSFMGMTKMGMAAIFETRGNGDAHVILRGGKKGPNYDAAAIEDSCAILRAAGLREQVMVDCSHANSGKSHARQA DVARDLAQQLSSGERRISGVMIESHLEEGRQDLKPGVPLQRGVSITDACLGWSQTEPLLETLATAVRARRRG >Mature_391_residues GNRRTAPVSAHRSCFQEFSVIRIDNPQSDQEVGVADATQDTTRIDDVRIGAVRPLISPALLLDELPVSPAVQAHVEASRA AVTDILHGRDDRLLAVVGPCSIHDHDQALDYAHRLGTAANRLRDDLLIVMRVYFEKPRTTVGWKGYINDPRLDGSFRINE GLRRARQLLLEVNAMGLPAATEFLDLLSPQYIADLIAWGAIGARTTESQSHRQLASGLSCPIGFKNGTDGGVQIAADAIL AARSSHSFMGMTKMGMAAIFETRGNGDAHVILRGGKKGPNYDAAAIEDSCAILRAAGLREQVMVDCSHANSGKSHARQAD VARDLAQQLSSGERRISGVMIESHLEEGRQDLKPGVPLQRGVSITDACLGWSQTEPLLETLATAVRARRRG
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=345, Percent_Identity=58.5507246376812, Blast_Score=415, Evalue=1e-117, Organism=Escherichia coli, GI1787996, Length=346, Percent_Identity=54.0462427745665, Blast_Score=381, Evalue=1e-107, Organism=Escherichia coli, GI1788953, Length=339, Percent_Identity=51.622418879056, Blast_Score=352, Evalue=2e-98, Organism=Saccharomyces cerevisiae, GI6320240, Length=362, Percent_Identity=51.1049723756906, Blast_Score=372, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6319726, Length=352, Percent_Identity=52.8409090909091, Blast_Score=367, Evalue=1e-102,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 42387; Mature: 42255
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNRRTAPVSAHRSCFQEFSVIRIDNPQSDQEVGVADATQDTTRIDDVRIGAVRPLISPA CCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHCCEEECHHHHHHHHH LLLDELPVSPAVQAHVEASRAAVTDILHGRDDRLLAVVGPCSIHDHDQALDYAHRLGTAA HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH NRLRDDLLIVMRVYFEKPRTTVGWKGYINDPRLDGSFRINEGLRRARQLLLEVNAMGLPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCH ATEFLDLLSPQYIADLIAWGAIGARTTESQSHRQLASGLSCPIGFKNGTDGGVQIAADAI HHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH LAARSSHSFMGMTKMGMAAIFETRGNGDAHVILRGGKKGPNYDAAAIEDSCAILRAAGLR HHHCCCCCHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC EQVMVDCSHANSGKSHARQADVARDLAQQLSSGERRISGVMIESHLEEGRQDLKPGVPLQ HHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHH RGVSITDACLGWSQTEPLLETLATAVRARRRG HCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure GNRRTAPVSAHRSCFQEFSVIRIDNPQSDQEVGVADATQDTTRIDDVRIGAVRPLISPA CCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHCCEEECHHHHHHHHH LLLDELPVSPAVQAHVEASRAAVTDILHGRDDRLLAVVGPCSIHDHDQALDYAHRLGTAA HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH NRLRDDLLIVMRVYFEKPRTTVGWKGYINDPRLDGSFRINEGLRRARQLLLEVNAMGLPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCH ATEFLDLLSPQYIADLIAWGAIGARTTESQSHRQLASGLSCPIGFKNGTDGGVQIAADAI HHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH LAARSSHSFMGMTKMGMAAIFETRGNGDAHVILRGGKKGPNYDAAAIEDSCAILRAAGLR HHHCCCCCHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC EQVMVDCSHANSGKSHARQADVARDLAQQLSSGERRISGVMIESHLEEGRQDLKPGVPLQ HHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHH RGVSITDACLGWSQTEPLLETLATAVRARRRG HCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]