| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is cheZ2 [H]
Identifier: 161621734
GI number: 161621734
Start: 787949
End: 788611
Strand: Direct
Name: cheZ2 [H]
Synonym: RSc0742
Alternate gene names: 161621734
Gene position: 787949-788611 (Clockwise)
Preceding gene: 17545460
Following gene: 17545462
Centisome position: 21.2
GC content: 65.76
Gene sequence:
>663_bases ATGAGCGAAATGCACGATGGCAGCCCCGTCCAGGCTGACAGGGCTGCCGCGGATGCCGAACCCTTGCCCGACATGCTGCA GCGGATCGGGTATCTGACCCGCATGCTGCGCGAAAGCCTGCGTGAACTGGGCCTGGACAAAGGCATCGAACGCGCTGCGT CCGCCATTCCCGACGCGCGCGATCGGCTGAACTACGTCGCGAACATGACGGAGCAGGCGGCCATGCGCGCCCTGAATGCC ATCGATGCGGCTCGCCCGGTGCAGGACGCCTTGGCGGGCGAGGCGGAGGCGCTGGTCAGGCGCTGGCAGGCCTGGATGGA CCGCCGGTTGAGCGACGAGGAGATTCGCGACCTGGTGGGCGAGACCCGCGGCTTCCTGCGCGACGTGCCGCAGAAGACCC GCGACACCAACCAGCAGTTGATGGAGATTCTGATGGCGCAGGATTTCCAGGACCTGACCGGCCAGGTGATCAAGAAGGTG CTGGATTTGATCCAGTTCATTGAGACCGAGCTGATCGGCATCCTGACGGACAACGCGCCCGCGCATCGGAGCGCGGAGGT CGCGCCGACGCTGCTCAACGGTCCGCAGGTCAATCCCGATCCCCCCGACGTGGTCGCCGGCCAGGAACAGGTGGACGATC TGCTGGAAAGCCTGGGTTTCTGA
Upstream 100 bases:
>100_bases AGGCCGGTGCCAGCGGCTACGTGGTCAAGCCGTTCACCGCGGCCACGCTGGGCGAAAAACTGAACAAGATTTTCGAGAAG TTCGAAAGAGCGGAGGCCTG
Downstream 100 bases:
>100_bases GCCGGCTCAAGTCCGCCTTCAGTCTGCGCATCCGAAACCCGAGCTCGACTCACTACAATACCCGCCTGCGCTGCCATCCG CCGCTCGCCCCGCCGATTTC
Product: chemotaxis regulator CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSEMHDGSPVQADRAAADAEPLPDMLQRIGYLTRMLRESLRELGLDKGIERAASAIPDARDRLNYVANMTEQAAMRALNA IDAARPVQDALAGEAEALVRRWQAWMDRRLSDEEIRDLVGETRGFLRDVPQKTRDTNQQLMEILMAQDFQDLTGQVIKKV LDLIQFIETELIGILTDNAPAHRSAEVAPTLLNGPQVNPDPPDVVAGQEQVDDLLESLGF
Sequences:
>Translated_220_residues MSEMHDGSPVQADRAAADAEPLPDMLQRIGYLTRMLRESLRELGLDKGIERAASAIPDARDRLNYVANMTEQAAMRALNA IDAARPVQDALAGEAEALVRRWQAWMDRRLSDEEIRDLVGETRGFLRDVPQKTRDTNQQLMEILMAQDFQDLTGQVIKKV LDLIQFIETELIGILTDNAPAHRSAEVAPTLLNGPQVNPDPPDVVAGQEQVDDLLESLGF >Mature_219_residues SEMHDGSPVQADRAAADAEPLPDMLQRIGYLTRMLRESLRELGLDKGIERAASAIPDARDRLNYVANMTEQAAMRALNAI DAARPVQDALAGEAEALVRRWQAWMDRRLSDEEIRDLVGETRGFLRDVPQKTRDTNQQLMEILMAQDFQDLTGQVIKKVL DLIQFIETELIGILTDNAPAHRSAEVAPTLLNGPQVNPDPPDVVAGQEQVDDLLESLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=206, Percent_Identity=55.8252427184466, Blast_Score=203, Evalue=8e-54,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 24453; Mature: 24322
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMHDGSPVQADRAAADAEPLPDMLQRIGYLTRMLRESLRELGLDKGIERAASAIPDAR CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHH DRLNYVANMTEQAAMRALNAIDAARPVQDALAGEAEALVRRWQAWMDRRLSDEEIRDLVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH ETRGFLRDVPQKTRDTNQQLMEILMAQDFQDLTGQVIKKVLDLIQFIETELIGILTDNAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AHRSAEVAPTLLNGPQVNPDPPDVVAGQEQVDDLLESLGF CCCCHHHCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SEMHDGSPVQADRAAADAEPLPDMLQRIGYLTRMLRESLRELGLDKGIERAASAIPDAR CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHH DRLNYVANMTEQAAMRALNAIDAARPVQDALAGEAEALVRRWQAWMDRRLSDEEIRDLVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH ETRGFLRDVPQKTRDTNQQLMEILMAQDFQDLTGQVIKKVLDLIQFIETELIGILTDNAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AHRSAEVAPTLLNGPQVNPDPPDVVAGQEQVDDLLESLGF CCCCHHHCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]