| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545464
Identifier: 17545464
GI number: 17545464
Start: 790953
End: 791438
Strand: Direct
Name: 17545464
Synonym: RSc0745
Alternate gene names: NA
Gene position: 790953-791438 (Clockwise)
Preceding gene: 17545462
Following gene: 17545465
Centisome position: 21.28
GC content: 68.93
Gene sequence:
>486_bases ATGTCCCTGCGCCTCTATCTCGCCGGTCCCGATGTCTTCCGTCCGCAGCCCGTTGCCCATGGCGATGCCTTGAAGGCCCT GTGCGCGGCGTACGGCTTCATCGGCCTCTACCCGTTCGACAATGCCGTCGCCCCGCAGGCCGATGGTCCCGCGACGGCGG CGGAAATCTATCGCCAGAACATCGCGCTGCTCGATTCGGCCGATGCGGTGCTGGCCAACGTGGCGGACTTCCGAGGCCAC GAGCCCGATTCGGGCACCTGCTTCGAGATCGGCTACGCCATCGCGCGCGGCAAGGCGGTGTGGTGCTACAACGTGCCCGC CGTGCCGCTCGTGGCGCAGGTGCCGAACGTGGACGGCAGCGATGCCGACGGCTGGGCCGTGGAGGATTTCGGCCTGCCGC GCAACCTGATGCTTGCCTGCAGCAGCCGGCTCGTGGCCGGGGATGCGCGCGCCTGCCTGGAGCGCATGCGGGCGCATTAC GCATAG
Upstream 100 bases:
>100_bases CGGACGAAAAGCGGGCAAGGATAGCATCCGCGCGGGATCAGGCGCACGGCGCGGGCCGGGCGTTATCCTGTGCGGCCATG TTTTCATTGCGCCTACGTCC
Downstream 100 bases:
>100_bases CCGCGCATGGGCGTGCGCCCGATGAGCGCATGCGCGCGCCCTCCGCGACTCGATCGCTTCCGGCACAACGCGCGCGCCCA CACGCTGCACGATCCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside 2-Deoxyribosyltransferase Family Protein; Nucleoside 2-Deoxyribosyltransferase Protein
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSLRLYLAGPDVFRPQPVAHGDALKALCAAYGFIGLYPFDNAVAPQADGPATAAEIYRQNIALLDSADAVLANVADFRGH EPDSGTCFEIGYAIARGKAVWCYNVPAVPLVAQVPNVDGSDADGWAVEDFGLPRNLMLACSSRLVAGDARACLERMRAHY A
Sequences:
>Translated_161_residues MSLRLYLAGPDVFRPQPVAHGDALKALCAAYGFIGLYPFDNAVAPQADGPATAAEIYRQNIALLDSADAVLANVADFRGH EPDSGTCFEIGYAIARGKAVWCYNVPAVPLVAQVPNVDGSDADGWAVEDFGLPRNLMLACSSRLVAGDARACLERMRAHY A >Mature_160_residues SLRLYLAGPDVFRPQPVAHGDALKALCAAYGFIGLYPFDNAVAPQADGPATAAEIYRQNIALLDSADAVLANVADFRGHE PDSGTCFEIGYAIARGKAVWCYNVPAVPLVAQVPNVDGSDADGWAVEDFGLPRNLMLACSSRLVAGDARACLERMRAHYA
Specific function: Unknown
COG id: COG3613
COG function: function code F; Nucleoside 2-deoxyribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17113; Mature: 16981
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRLYLAGPDVFRPQPVAHGDALKALCAAYGFIGLYPFDNAVAPQADGPATAAEIYRQN CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHH IALLDSADAVLANVADFRGHEPDSGTCFEIGYAIARGKAVWCYNVPAVPLVAQVPNVDGS HHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCC DADGWAVEDFGLPRNLMLACSSRLVAGDARACLERMRAHYA CCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SLRLYLAGPDVFRPQPVAHGDALKALCAAYGFIGLYPFDNAVAPQADGPATAAEIYRQN CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHH IALLDSADAVLANVADFRGHEPDSGTCFEIGYAIARGKAVWCYNVPAVPLVAQVPNVDGS HHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCC DADGWAVEDFGLPRNLMLACSSRLVAGDARACLERMRAHYA CCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA